Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28397 | 85414;85415;85416 | chr2:178560943;178560942;178560941 | chr2:179425670;179425669;179425668 |
N2AB | 26756 | 80491;80492;80493 | chr2:178560943;178560942;178560941 | chr2:179425670;179425669;179425668 |
N2A | 25829 | 77710;77711;77712 | chr2:178560943;178560942;178560941 | chr2:179425670;179425669;179425668 |
N2B | 19332 | 58219;58220;58221 | chr2:178560943;178560942;178560941 | chr2:179425670;179425669;179425668 |
Novex-1 | 19457 | 58594;58595;58596 | chr2:178560943;178560942;178560941 | chr2:179425670;179425669;179425668 |
Novex-2 | 19524 | 58795;58796;58797 | chr2:178560943;178560942;178560941 | chr2:179425670;179425669;179425668 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | None | None | 0.999 | N | 0.511 | 0.215 | 0.297375071883 | gnomAD-4.0.0 | 1.36841E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79889E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1337 | likely_benign | 0.1304 | benign | -0.282 | Destabilizing | 0.999 | D | 0.67 | neutral | N | 0.499646436 | None | None | N |
E/C | 0.7556 | likely_pathogenic | 0.7435 | pathogenic | -0.063 | Destabilizing | 1.0 | D | 0.715 | prob.delet. | None | None | None | None | N |
E/D | 0.1256 | likely_benign | 0.1022 | benign | -0.36 | Destabilizing | 0.999 | D | 0.511 | neutral | N | 0.511374763 | None | None | N |
E/F | 0.6533 | likely_pathogenic | 0.6247 | pathogenic | -0.148 | Destabilizing | 1.0 | D | 0.685 | prob.neutral | None | None | None | None | N |
E/G | 0.2014 | likely_benign | 0.1798 | benign | -0.472 | Destabilizing | 1.0 | D | 0.64 | neutral | D | 0.526108483 | None | None | N |
E/H | 0.3929 | ambiguous | 0.373 | ambiguous | 0.151 | Stabilizing | 1.0 | D | 0.651 | neutral | None | None | None | None | N |
E/I | 0.22 | likely_benign | 0.2203 | benign | 0.181 | Stabilizing | 1.0 | D | 0.699 | prob.neutral | None | None | None | None | N |
E/K | 0.1441 | likely_benign | 0.1391 | benign | 0.414 | Stabilizing | 0.999 | D | 0.641 | neutral | N | 0.488579619 | None | None | N |
E/L | 0.2708 | likely_benign | 0.2649 | benign | 0.181 | Stabilizing | 1.0 | D | 0.704 | prob.neutral | None | None | None | None | N |
E/M | 0.3253 | likely_benign | 0.3336 | benign | 0.174 | Stabilizing | 1.0 | D | 0.657 | neutral | None | None | None | None | N |
E/N | 0.229 | likely_benign | 0.1969 | benign | 0.028 | Stabilizing | 1.0 | D | 0.697 | prob.neutral | None | None | None | None | N |
E/P | 0.3105 | likely_benign | 0.3008 | benign | 0.047 | Stabilizing | 1.0 | D | 0.694 | prob.neutral | None | None | None | None | N |
E/Q | 0.1322 | likely_benign | 0.1346 | benign | 0.07 | Stabilizing | 1.0 | D | 0.605 | neutral | N | 0.501203372 | None | None | N |
E/R | 0.2414 | likely_benign | 0.2357 | benign | 0.619 | Stabilizing | 1.0 | D | 0.691 | prob.neutral | None | None | None | None | N |
E/S | 0.2038 | likely_benign | 0.1864 | benign | -0.098 | Destabilizing | 0.999 | D | 0.654 | neutral | None | None | None | None | N |
E/T | 0.1777 | likely_benign | 0.1729 | benign | 0.062 | Stabilizing | 1.0 | D | 0.702 | prob.neutral | None | None | None | None | N |
E/V | 0.1351 | likely_benign | 0.1348 | benign | 0.047 | Stabilizing | 1.0 | D | 0.691 | prob.neutral | D | 0.529904596 | None | None | N |
E/W | 0.8442 | likely_pathogenic | 0.8255 | pathogenic | -0.005 | Destabilizing | 1.0 | D | 0.717 | prob.delet. | None | None | None | None | N |
E/Y | 0.5417 | ambiguous | 0.5004 | ambiguous | 0.099 | Stabilizing | 1.0 | D | 0.667 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.