Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28398 | 85417;85418;85419 | chr2:178560940;178560939;178560938 | chr2:179425667;179425666;179425665 |
N2AB | 26757 | 80494;80495;80496 | chr2:178560940;178560939;178560938 | chr2:179425667;179425666;179425665 |
N2A | 25830 | 77713;77714;77715 | chr2:178560940;178560939;178560938 | chr2:179425667;179425666;179425665 |
N2B | 19333 | 58222;58223;58224 | chr2:178560940;178560939;178560938 | chr2:179425667;179425666;179425665 |
Novex-1 | 19458 | 58597;58598;58599 | chr2:178560940;178560939;178560938 | chr2:179425667;179425666;179425665 |
Novex-2 | 19525 | 58798;58799;58800 | chr2:178560940;178560939;178560938 | chr2:179425667;179425666;179425665 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/V | rs878970622 | None | 0.437 | N | 0.395 | 0.153 | None | gnomAD-4.0.0 | 1.59124E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85798E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.4456 | ambiguous | 0.4326 | ambiguous | -2.192 | Highly Destabilizing | 0.919 | D | 0.433 | neutral | None | None | None | None | I |
I/C | 0.8552 | likely_pathogenic | 0.8625 | pathogenic | -1.457 | Destabilizing | 0.999 | D | 0.543 | neutral | None | None | None | None | I |
I/D | 0.9438 | likely_pathogenic | 0.9375 | pathogenic | -1.803 | Destabilizing | 0.996 | D | 0.727 | prob.delet. | None | None | None | None | I |
I/E | 0.8619 | likely_pathogenic | 0.8515 | pathogenic | -1.671 | Destabilizing | 0.996 | D | 0.719 | prob.delet. | None | None | None | None | I |
I/F | 0.2666 | likely_benign | 0.2793 | benign | -1.332 | Destabilizing | 0.968 | D | 0.439 | neutral | N | 0.487813286 | None | None | I |
I/G | 0.8688 | likely_pathogenic | 0.8586 | pathogenic | -2.647 | Highly Destabilizing | 0.996 | D | 0.705 | prob.neutral | None | None | None | None | I |
I/H | 0.8859 | likely_pathogenic | 0.8816 | pathogenic | -1.82 | Destabilizing | 0.999 | D | 0.722 | prob.delet. | None | None | None | None | I |
I/K | 0.7965 | likely_pathogenic | 0.7847 | pathogenic | -1.671 | Destabilizing | 0.988 | D | 0.707 | prob.neutral | None | None | None | None | I |
I/L | 0.113 | likely_benign | 0.1196 | benign | -0.937 | Destabilizing | 0.011 | N | 0.162 | neutral | N | 0.445704345 | None | None | I |
I/M | 0.0953 | likely_benign | 0.0957 | benign | -0.818 | Destabilizing | 0.968 | D | 0.457 | neutral | N | 0.495459835 | None | None | I |
I/N | 0.7187 | likely_pathogenic | 0.7005 | pathogenic | -1.708 | Destabilizing | 0.995 | D | 0.729 | prob.delet. | D | 0.542481672 | None | None | I |
I/P | 0.901 | likely_pathogenic | 0.8917 | pathogenic | -1.33 | Destabilizing | 0.996 | D | 0.731 | prob.delet. | None | None | None | None | I |
I/Q | 0.8122 | likely_pathogenic | 0.8056 | pathogenic | -1.704 | Destabilizing | 0.996 | D | 0.719 | prob.delet. | None | None | None | None | I |
I/R | 0.7279 | likely_pathogenic | 0.713 | pathogenic | -1.225 | Destabilizing | 0.988 | D | 0.729 | prob.delet. | None | None | None | None | I |
I/S | 0.6568 | likely_pathogenic | 0.637 | pathogenic | -2.413 | Highly Destabilizing | 0.984 | D | 0.606 | neutral | D | 0.530618388 | None | None | I |
I/T | 0.2796 | likely_benign | 0.2704 | benign | -2.137 | Highly Destabilizing | 0.946 | D | 0.496 | neutral | D | 0.539186309 | None | None | I |
I/V | 0.0992 | likely_benign | 0.1055 | benign | -1.33 | Destabilizing | 0.437 | N | 0.395 | neutral | N | 0.504968866 | None | None | I |
I/W | 0.8627 | likely_pathogenic | 0.859 | pathogenic | -1.505 | Destabilizing | 0.999 | D | 0.708 | prob.delet. | None | None | None | None | I |
I/Y | 0.7282 | likely_pathogenic | 0.7365 | pathogenic | -1.271 | Destabilizing | 0.988 | D | 0.562 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.