Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28413 | 85462;85463;85464 | chr2:178560895;178560894;178560893 | chr2:179425622;179425621;179425620 |
N2AB | 26772 | 80539;80540;80541 | chr2:178560895;178560894;178560893 | chr2:179425622;179425621;179425620 |
N2A | 25845 | 77758;77759;77760 | chr2:178560895;178560894;178560893 | chr2:179425622;179425621;179425620 |
N2B | 19348 | 58267;58268;58269 | chr2:178560895;178560894;178560893 | chr2:179425622;179425621;179425620 |
Novex-1 | 19473 | 58642;58643;58644 | chr2:178560895;178560894;178560893 | chr2:179425622;179425621;179425620 |
Novex-2 | 19540 | 58843;58844;58845 | chr2:178560895;178560894;178560893 | chr2:179425622;179425621;179425620 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | None | None | 0.999 | N | 0.628 | 0.46 | 0.137902524267 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1784 | likely_benign | 0.162 | benign | -1.07 | Destabilizing | 0.999 | D | 0.628 | neutral | N | 0.469174984 | None | None | N |
T/C | 0.4937 | ambiguous | 0.459 | ambiguous | -0.862 | Destabilizing | 1.0 | D | 0.817 | deleterious | None | None | None | None | N |
T/D | 0.9656 | likely_pathogenic | 0.9604 | pathogenic | -2.071 | Highly Destabilizing | 1.0 | D | 0.809 | deleterious | None | None | None | None | N |
T/E | 0.9679 | likely_pathogenic | 0.9632 | pathogenic | -1.792 | Destabilizing | 1.0 | D | 0.803 | deleterious | None | None | None | None | N |
T/F | 0.8509 | likely_pathogenic | 0.8001 | pathogenic | -0.668 | Destabilizing | 1.0 | D | 0.862 | deleterious | None | None | None | None | N |
T/G | 0.6988 | likely_pathogenic | 0.6693 | pathogenic | -1.535 | Destabilizing | 1.0 | D | 0.805 | deleterious | None | None | None | None | N |
T/H | 0.8564 | likely_pathogenic | 0.8265 | pathogenic | -1.688 | Destabilizing | 1.0 | D | 0.847 | deleterious | None | None | None | None | N |
T/I | 0.6656 | likely_pathogenic | 0.6016 | pathogenic | 0.183 | Stabilizing | 1.0 | D | 0.839 | deleterious | N | 0.491064477 | None | None | N |
T/K | 0.9547 | likely_pathogenic | 0.9465 | pathogenic | -0.356 | Destabilizing | 1.0 | D | 0.803 | deleterious | None | None | None | None | N |
T/L | 0.3854 | ambiguous | 0.3439 | ambiguous | 0.183 | Stabilizing | 0.999 | D | 0.715 | prob.delet. | None | None | None | None | N |
T/M | 0.2839 | likely_benign | 0.2506 | benign | 0.02 | Stabilizing | 1.0 | D | 0.819 | deleterious | None | None | None | None | N |
T/N | 0.7509 | likely_pathogenic | 0.6325 | pathogenic | -1.444 | Destabilizing | 1.0 | D | 0.749 | deleterious | N | 0.492331924 | None | None | N |
T/P | 0.9287 | likely_pathogenic | 0.9236 | pathogenic | -0.205 | Destabilizing | 1.0 | D | 0.845 | deleterious | N | 0.476936694 | None | None | N |
T/Q | 0.8927 | likely_pathogenic | 0.8781 | pathogenic | -0.981 | Destabilizing | 1.0 | D | 0.851 | deleterious | None | None | None | None | N |
T/R | 0.9227 | likely_pathogenic | 0.9048 | pathogenic | -0.862 | Destabilizing | 1.0 | D | 0.842 | deleterious | None | None | None | None | N |
T/S | 0.2415 | likely_benign | 0.2411 | benign | -1.572 | Destabilizing | 0.999 | D | 0.613 | neutral | N | 0.459496708 | None | None | N |
T/V | 0.3965 | ambiguous | 0.3517 | ambiguous | -0.205 | Destabilizing | 0.999 | D | 0.619 | neutral | None | None | None | None | N |
T/W | 0.9817 | likely_pathogenic | 0.9752 | pathogenic | -1.025 | Destabilizing | 1.0 | D | 0.829 | deleterious | None | None | None | None | N |
T/Y | 0.8933 | likely_pathogenic | 0.8599 | pathogenic | -0.562 | Destabilizing | 1.0 | D | 0.86 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.