Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28415 | 85468;85469;85470 | chr2:178560889;178560888;178560887 | chr2:179425616;179425615;179425614 |
N2AB | 26774 | 80545;80546;80547 | chr2:178560889;178560888;178560887 | chr2:179425616;179425615;179425614 |
N2A | 25847 | 77764;77765;77766 | chr2:178560889;178560888;178560887 | chr2:179425616;179425615;179425614 |
N2B | 19350 | 58273;58274;58275 | chr2:178560889;178560888;178560887 | chr2:179425616;179425615;179425614 |
Novex-1 | 19475 | 58648;58649;58650 | chr2:178560889;178560888;178560887 | chr2:179425616;179425615;179425614 |
Novex-2 | 19542 | 58849;58850;58851 | chr2:178560889;178560888;178560887 | chr2:179425616;179425615;179425614 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/F | None | None | 0.978 | N | 0.785 | 0.501 | 0.675152924593 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.8988 | likely_pathogenic | 0.8872 | pathogenic | -2.671 | Highly Destabilizing | 0.944 | D | 0.736 | prob.delet. | None | None | None | None | N |
L/C | 0.8368 | likely_pathogenic | 0.8137 | pathogenic | -1.916 | Destabilizing | 0.999 | D | 0.848 | deleterious | None | None | None | None | N |
L/D | 0.9993 | likely_pathogenic | 0.999 | pathogenic | -3.451 | Highly Destabilizing | 0.997 | D | 0.917 | deleterious | None | None | None | None | N |
L/E | 0.9943 | likely_pathogenic | 0.9924 | pathogenic | -3.12 | Highly Destabilizing | 0.997 | D | 0.904 | deleterious | None | None | None | None | N |
L/F | 0.452 | ambiguous | 0.4306 | ambiguous | -1.618 | Destabilizing | 0.978 | D | 0.785 | deleterious | N | 0.517419339 | None | None | N |
L/G | 0.9853 | likely_pathogenic | 0.9821 | pathogenic | -3.293 | Highly Destabilizing | 0.992 | D | 0.897 | deleterious | None | None | None | None | N |
L/H | 0.9765 | likely_pathogenic | 0.9678 | pathogenic | -3.016 | Highly Destabilizing | 0.999 | D | 0.909 | deleterious | None | None | None | None | N |
L/I | 0.157 | likely_benign | 0.1662 | benign | -0.801 | Destabilizing | 0.039 | N | 0.357 | neutral | N | 0.494515691 | None | None | N |
L/K | 0.9866 | likely_pathogenic | 0.9828 | pathogenic | -2.159 | Highly Destabilizing | 0.992 | D | 0.899 | deleterious | None | None | None | None | N |
L/M | 0.2994 | likely_benign | 0.2797 | benign | -0.93 | Destabilizing | 0.983 | D | 0.772 | deleterious | None | None | None | None | N |
L/N | 0.9952 | likely_pathogenic | 0.9935 | pathogenic | -2.897 | Highly Destabilizing | 0.997 | D | 0.926 | deleterious | None | None | None | None | N |
L/P | 0.9936 | likely_pathogenic | 0.991 | pathogenic | -1.415 | Destabilizing | 0.997 | D | 0.926 | deleterious | None | None | None | None | N |
L/Q | 0.9675 | likely_pathogenic | 0.9568 | pathogenic | -2.525 | Highly Destabilizing | 0.999 | D | 0.925 | deleterious | None | None | None | None | N |
L/R | 0.9717 | likely_pathogenic | 0.9632 | pathogenic | -2.249 | Highly Destabilizing | 0.997 | D | 0.921 | deleterious | None | None | None | None | N |
L/S | 0.989 | likely_pathogenic | 0.9851 | pathogenic | -3.461 | Highly Destabilizing | 0.989 | D | 0.893 | deleterious | D | 0.56618915 | None | None | N |
L/T | 0.9644 | likely_pathogenic | 0.9588 | pathogenic | -2.957 | Highly Destabilizing | 0.983 | D | 0.833 | deleterious | None | None | None | None | N |
L/V | 0.2114 | likely_benign | 0.214 | benign | -1.415 | Destabilizing | 0.476 | N | 0.705 | prob.neutral | N | 0.509443622 | None | None | N |
L/W | 0.9089 | likely_pathogenic | 0.8767 | pathogenic | -2.043 | Highly Destabilizing | 0.999 | D | 0.887 | deleterious | None | None | None | None | N |
L/Y | 0.9218 | likely_pathogenic | 0.9005 | pathogenic | -1.796 | Destabilizing | 0.992 | D | 0.847 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.