Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2843 | 8752;8753;8754 | chr2:178770174;178770173;178770172 | chr2:179634901;179634900;179634899 |
N2AB | 2843 | 8752;8753;8754 | chr2:178770174;178770173;178770172 | chr2:179634901;179634900;179634899 |
N2A | 2843 | 8752;8753;8754 | chr2:178770174;178770173;178770172 | chr2:179634901;179634900;179634899 |
N2B | 2797 | 8614;8615;8616 | chr2:178770174;178770173;178770172 | chr2:179634901;179634900;179634899 |
Novex-1 | 2797 | 8614;8615;8616 | chr2:178770174;178770173;178770172 | chr2:179634901;179634900;179634899 |
Novex-2 | 2797 | 8614;8615;8616 | chr2:178770174;178770173;178770172 | chr2:179634901;179634900;179634899 |
Novex-3 | 2843 | 8752;8753;8754 | chr2:178770174;178770173;178770172 | chr2:179634901;179634900;179634899 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/G | None | None | 0.379 | N | 0.453 | 0.366 | 0.796139353377 | gnomAD-4.0.0 | 1.59046E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85649E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.3533 | ambiguous | 0.3339 | benign | -1.252 | Destabilizing | 0.201 | N | 0.28 | neutral | N | 0.505662597 | None | None | N |
V/C | 0.8313 | likely_pathogenic | 0.835 | pathogenic | -0.686 | Destabilizing | 0.992 | D | 0.406 | neutral | None | None | None | None | N |
V/D | 0.7069 | likely_pathogenic | 0.6541 | pathogenic | -1.11 | Destabilizing | 0.81 | D | 0.484 | neutral | D | 0.536287553 | None | None | N |
V/E | 0.5656 | likely_pathogenic | 0.5106 | ambiguous | -1.173 | Destabilizing | 0.85 | D | 0.454 | neutral | None | None | None | None | N |
V/F | 0.2142 | likely_benign | 0.2007 | benign | -1.124 | Destabilizing | 0.81 | D | 0.418 | neutral | N | 0.507773072 | None | None | N |
V/G | 0.4596 | ambiguous | 0.4169 | ambiguous | -1.498 | Destabilizing | 0.379 | N | 0.453 | neutral | N | 0.500550004 | None | None | N |
V/H | 0.7126 | likely_pathogenic | 0.6902 | pathogenic | -1.06 | Destabilizing | 0.992 | D | 0.457 | neutral | None | None | None | None | N |
V/I | 0.0805 | likely_benign | 0.0861 | benign | -0.7 | Destabilizing | 0.002 | N | 0.105 | neutral | N | 0.490476701 | None | None | N |
V/K | 0.6744 | likely_pathogenic | 0.6152 | pathogenic | -1.087 | Destabilizing | 0.617 | D | 0.444 | neutral | None | None | None | None | N |
V/L | 0.2132 | likely_benign | 0.2101 | benign | -0.7 | Destabilizing | 0.002 | N | 0.08 | neutral | N | 0.475035349 | None | None | N |
V/M | 0.1974 | likely_benign | 0.2168 | benign | -0.43 | Destabilizing | 0.127 | N | 0.202 | neutral | None | None | None | None | N |
V/N | 0.5213 | ambiguous | 0.5116 | ambiguous | -0.705 | Destabilizing | 0.85 | D | 0.493 | neutral | None | None | None | None | N |
V/P | 0.9655 | likely_pathogenic | 0.937 | pathogenic | -0.849 | Destabilizing | 0.92 | D | 0.469 | neutral | None | None | None | None | N |
V/Q | 0.5035 | ambiguous | 0.4766 | ambiguous | -0.962 | Destabilizing | 0.92 | D | 0.479 | neutral | None | None | None | None | N |
V/R | 0.6274 | likely_pathogenic | 0.5504 | ambiguous | -0.479 | Destabilizing | 0.85 | D | 0.495 | neutral | None | None | None | None | N |
V/S | 0.3675 | ambiguous | 0.366 | ambiguous | -1.13 | Destabilizing | 0.021 | N | 0.293 | neutral | None | None | None | None | N |
V/T | 0.3257 | likely_benign | 0.3415 | ambiguous | -1.099 | Destabilizing | 0.447 | N | 0.285 | neutral | None | None | None | None | N |
V/W | 0.887 | likely_pathogenic | 0.8589 | pathogenic | -1.245 | Destabilizing | 0.992 | D | 0.493 | neutral | None | None | None | None | N |
V/Y | 0.6391 | likely_pathogenic | 0.6363 | pathogenic | -0.996 | Destabilizing | 0.92 | D | 0.431 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.