Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28433 | 85522;85523;85524 | chr2:178560835;178560834;178560833 | chr2:179425562;179425561;179425560 |
N2AB | 26792 | 80599;80600;80601 | chr2:178560835;178560834;178560833 | chr2:179425562;179425561;179425560 |
N2A | 25865 | 77818;77819;77820 | chr2:178560835;178560834;178560833 | chr2:179425562;179425561;179425560 |
N2B | 19368 | 58327;58328;58329 | chr2:178560835;178560834;178560833 | chr2:179425562;179425561;179425560 |
Novex-1 | 19493 | 58702;58703;58704 | chr2:178560835;178560834;178560833 | chr2:179425562;179425561;179425560 |
Novex-2 | 19560 | 58903;58904;58905 | chr2:178560835;178560834;178560833 | chr2:179425562;179425561;179425560 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | rs1444500550 | 0.261 | 0.081 | N | 0.306 | 0.146 | 0.183819452728 | gnomAD-2.1.1 | 1.21E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 1.68105E-04 | None | 0 | None | 0 | 0 | 0 |
K/N | rs1444500550 | 0.261 | 0.081 | N | 0.306 | 0.146 | 0.183819452728 | gnomAD-3.1.2 | 1.31E-05 | None | None | None | None | I | None | 4.83E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
K/N | rs1444500550 | 0.261 | 0.081 | N | 0.306 | 0.146 | 0.183819452728 | gnomAD-4.0.0 | 3.1832E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 5.55988E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.4464 | ambiguous | 0.4454 | ambiguous | -0.239 | Destabilizing | 0.025 | N | 0.338 | neutral | None | None | None | None | I |
K/C | 0.619 | likely_pathogenic | 0.6016 | pathogenic | -0.313 | Destabilizing | 0.958 | D | 0.413 | neutral | None | None | None | None | I |
K/D | 0.7148 | likely_pathogenic | 0.7067 | pathogenic | 0.083 | Stabilizing | 0.104 | N | 0.377 | neutral | None | None | None | None | I |
K/E | 0.1934 | likely_benign | 0.2013 | benign | 0.101 | Stabilizing | 0.019 | N | 0.227 | neutral | N | 0.487055109 | None | None | I |
K/F | 0.8456 | likely_pathogenic | 0.8366 | pathogenic | -0.448 | Destabilizing | 0.667 | D | 0.443 | neutral | None | None | None | None | I |
K/G | 0.5741 | likely_pathogenic | 0.5507 | ambiguous | -0.477 | Destabilizing | 0.055 | N | 0.445 | neutral | None | None | None | None | I |
K/H | 0.2531 | likely_benign | 0.2475 | benign | -0.925 | Destabilizing | None | N | 0.197 | neutral | None | None | None | None | I |
K/I | 0.476 | ambiguous | 0.4813 | ambiguous | 0.317 | Stabilizing | 0.667 | D | 0.467 | neutral | None | None | None | None | I |
K/L | 0.474 | ambiguous | 0.4678 | ambiguous | 0.317 | Stabilizing | 0.104 | N | 0.414 | neutral | None | None | None | None | I |
K/M | 0.2783 | likely_benign | 0.279 | benign | 0.366 | Stabilizing | 0.602 | D | 0.408 | neutral | D | 0.536523924 | None | None | I |
K/N | 0.481 | ambiguous | 0.4706 | ambiguous | 0.103 | Stabilizing | 0.081 | N | 0.306 | neutral | N | 0.485847822 | None | None | I |
K/P | 0.9699 | likely_pathogenic | 0.9623 | pathogenic | 0.161 | Stabilizing | 0.364 | N | 0.472 | neutral | None | None | None | None | I |
K/Q | 0.097 | likely_benign | 0.0972 | benign | -0.158 | Destabilizing | None | N | 0.134 | neutral | N | 0.463660961 | None | None | I |
K/R | 0.0787 | likely_benign | 0.0795 | benign | -0.143 | Destabilizing | None | N | 0.139 | neutral | N | 0.504507506 | None | None | I |
K/S | 0.3958 | ambiguous | 0.3967 | ambiguous | -0.511 | Destabilizing | 0.002 | N | 0.155 | neutral | None | None | None | None | I |
K/T | 0.15 | likely_benign | 0.1598 | benign | -0.33 | Destabilizing | 0.042 | N | 0.373 | neutral | N | 0.477760835 | None | None | I |
K/V | 0.4097 | ambiguous | 0.4185 | ambiguous | 0.161 | Stabilizing | 0.22 | N | 0.457 | neutral | None | None | None | None | I |
K/W | 0.7625 | likely_pathogenic | 0.7509 | pathogenic | -0.355 | Destabilizing | 0.958 | D | 0.425 | neutral | None | None | None | None | I |
K/Y | 0.6809 | likely_pathogenic | 0.6675 | pathogenic | 0.006 | Stabilizing | 0.22 | N | 0.463 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.