Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28435 | 85528;85529;85530 | chr2:178560829;178560828;178560827 | chr2:179425556;179425555;179425554 |
N2AB | 26794 | 80605;80606;80607 | chr2:178560829;178560828;178560827 | chr2:179425556;179425555;179425554 |
N2A | 25867 | 77824;77825;77826 | chr2:178560829;178560828;178560827 | chr2:179425556;179425555;179425554 |
N2B | 19370 | 58333;58334;58335 | chr2:178560829;178560828;178560827 | chr2:179425556;179425555;179425554 |
Novex-1 | 19495 | 58708;58709;58710 | chr2:178560829;178560828;178560827 | chr2:179425556;179425555;179425554 |
Novex-2 | 19562 | 58909;58910;58911 | chr2:178560829;178560828;178560827 | chr2:179425556;179425555;179425554 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | None | None | 0.025 | N | 0.322 | 0.203 | None | gnomAD-4.0.0 | 2.05282E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 4.97051E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.2345 | likely_benign | 0.2479 | benign | -0.357 | Destabilizing | 0.025 | N | 0.322 | neutral | N | 0.505331438 | None | None | I |
V/C | 0.85 | likely_pathogenic | 0.8615 | pathogenic | -0.816 | Destabilizing | 0.997 | D | 0.536 | neutral | None | None | None | None | I |
V/D | 0.5388 | ambiguous | 0.5959 | pathogenic | -0.348 | Destabilizing | 0.983 | D | 0.623 | neutral | N | 0.495250517 | None | None | I |
V/E | 0.4877 | ambiguous | 0.5419 | ambiguous | -0.467 | Destabilizing | 0.975 | D | 0.547 | neutral | None | None | None | None | I |
V/F | 0.3171 | likely_benign | 0.3386 | benign | -0.751 | Destabilizing | 0.983 | D | 0.528 | neutral | N | 0.484389337 | None | None | I |
V/G | 0.3816 | ambiguous | 0.3968 | ambiguous | -0.41 | Destabilizing | 0.935 | D | 0.519 | neutral | D | 0.534307551 | None | None | I |
V/H | 0.763 | likely_pathogenic | 0.7805 | pathogenic | -0.041 | Destabilizing | 0.999 | D | 0.646 | neutral | None | None | None | None | I |
V/I | 0.0945 | likely_benign | 0.0954 | benign | -0.359 | Destabilizing | 0.773 | D | 0.427 | neutral | N | 0.485534956 | None | None | I |
V/K | 0.5547 | ambiguous | 0.5991 | pathogenic | -0.39 | Destabilizing | 0.975 | D | 0.551 | neutral | None | None | None | None | I |
V/L | 0.3552 | ambiguous | 0.3692 | ambiguous | -0.359 | Destabilizing | 0.63 | D | 0.425 | neutral | N | 0.515895148 | None | None | I |
V/M | 0.2583 | likely_benign | 0.2609 | benign | -0.561 | Destabilizing | 0.996 | D | 0.526 | neutral | None | None | None | None | I |
V/N | 0.4667 | ambiguous | 0.4846 | ambiguous | -0.204 | Destabilizing | 0.987 | D | 0.643 | neutral | None | None | None | None | I |
V/P | 0.5316 | ambiguous | 0.5306 | ambiguous | -0.331 | Destabilizing | 0.987 | D | 0.568 | neutral | None | None | None | None | I |
V/Q | 0.5294 | ambiguous | 0.5643 | pathogenic | -0.416 | Destabilizing | 0.987 | D | 0.589 | neutral | None | None | None | None | I |
V/R | 0.4807 | ambiguous | 0.519 | ambiguous | 0.055 | Stabilizing | 0.987 | D | 0.644 | neutral | None | None | None | None | I |
V/S | 0.3481 | ambiguous | 0.3618 | ambiguous | -0.509 | Destabilizing | 0.95 | D | 0.462 | neutral | None | None | None | None | I |
V/T | 0.282 | likely_benign | 0.2917 | benign | -0.537 | Destabilizing | 0.916 | D | 0.455 | neutral | None | None | None | None | I |
V/W | 0.9278 | likely_pathogenic | 0.9321 | pathogenic | -0.806 | Destabilizing | 0.999 | D | 0.723 | prob.delet. | None | None | None | None | I |
V/Y | 0.725 | likely_pathogenic | 0.7588 | pathogenic | -0.533 | Destabilizing | 0.996 | D | 0.527 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.