Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28438 | 85537;85538;85539 | chr2:178560820;178560819;178560818 | chr2:179425547;179425546;179425545 |
N2AB | 26797 | 80614;80615;80616 | chr2:178560820;178560819;178560818 | chr2:179425547;179425546;179425545 |
N2A | 25870 | 77833;77834;77835 | chr2:178560820;178560819;178560818 | chr2:179425547;179425546;179425545 |
N2B | 19373 | 58342;58343;58344 | chr2:178560820;178560819;178560818 | chr2:179425547;179425546;179425545 |
Novex-1 | 19498 | 58717;58718;58719 | chr2:178560820;178560819;178560818 | chr2:179425547;179425546;179425545 |
Novex-2 | 19565 | 58918;58919;58920 | chr2:178560820;178560819;178560818 | chr2:179425547;179425546;179425545 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/S | None | None | 0.999 | N | 0.607 | 0.23 | 0.317084106153 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1122 | likely_benign | 0.1109 | benign | -0.344 | Destabilizing | 0.999 | D | 0.583 | neutral | N | 0.494491421 | None | None | I |
T/C | 0.4033 | ambiguous | 0.4302 | ambiguous | -0.208 | Destabilizing | 1.0 | D | 0.683 | prob.neutral | None | None | None | None | I |
T/D | 0.4473 | ambiguous | 0.4371 | ambiguous | 0.152 | Stabilizing | 1.0 | D | 0.742 | deleterious | None | None | None | None | I |
T/E | 0.2832 | likely_benign | 0.2849 | benign | 0.063 | Stabilizing | 1.0 | D | 0.743 | deleterious | None | None | None | None | I |
T/F | 0.2146 | likely_benign | 0.2189 | benign | -0.911 | Destabilizing | 1.0 | D | 0.755 | deleterious | None | None | None | None | I |
T/G | 0.3129 | likely_benign | 0.3064 | benign | -0.448 | Destabilizing | 1.0 | D | 0.701 | prob.neutral | None | None | None | None | I |
T/H | 0.2773 | likely_benign | 0.2845 | benign | -0.798 | Destabilizing | 1.0 | D | 0.719 | prob.delet. | None | None | None | None | I |
T/I | 0.1515 | likely_benign | 0.1587 | benign | -0.194 | Destabilizing | 1.0 | D | 0.729 | prob.delet. | N | 0.486808873 | None | None | I |
T/K | 0.2424 | likely_benign | 0.2462 | benign | -0.31 | Destabilizing | 1.0 | D | 0.745 | deleterious | None | None | None | None | I |
T/L | 0.1202 | likely_benign | 0.1222 | benign | -0.194 | Destabilizing | 0.999 | D | 0.681 | prob.neutral | None | None | None | None | I |
T/M | 0.0939 | likely_benign | 0.0979 | benign | 0.038 | Stabilizing | 1.0 | D | 0.683 | prob.neutral | None | None | None | None | I |
T/N | 0.1283 | likely_benign | 0.1251 | benign | -0.056 | Destabilizing | 1.0 | D | 0.763 | deleterious | N | 0.519994246 | None | None | I |
T/P | 0.4402 | ambiguous | 0.414 | ambiguous | -0.217 | Destabilizing | 1.0 | D | 0.721 | prob.delet. | N | 0.511407588 | None | None | I |
T/Q | 0.2212 | likely_benign | 0.2249 | benign | -0.314 | Destabilizing | 1.0 | D | 0.741 | deleterious | None | None | None | None | I |
T/R | 0.2101 | likely_benign | 0.2158 | benign | -0.055 | Destabilizing | 1.0 | D | 0.731 | prob.delet. | None | None | None | None | I |
T/S | 0.1067 | likely_benign | 0.1034 | benign | -0.257 | Destabilizing | 0.999 | D | 0.607 | neutral | N | 0.430084318 | None | None | I |
T/V | 0.1313 | likely_benign | 0.1347 | benign | -0.217 | Destabilizing | 0.999 | D | 0.669 | neutral | None | None | None | None | I |
T/W | 0.5777 | likely_pathogenic | 0.5825 | pathogenic | -0.921 | Destabilizing | 1.0 | D | 0.716 | prob.delet. | None | None | None | None | I |
T/Y | 0.2789 | likely_benign | 0.2809 | benign | -0.631 | Destabilizing | 1.0 | D | 0.743 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.