Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28446 | 85561;85562;85563 | chr2:178560796;178560795;178560794 | chr2:179425523;179425522;179425521 |
N2AB | 26805 | 80638;80639;80640 | chr2:178560796;178560795;178560794 | chr2:179425523;179425522;179425521 |
N2A | 25878 | 77857;77858;77859 | chr2:178560796;178560795;178560794 | chr2:179425523;179425522;179425521 |
N2B | 19381 | 58366;58367;58368 | chr2:178560796;178560795;178560794 | chr2:179425523;179425522;179425521 |
Novex-1 | 19506 | 58741;58742;58743 | chr2:178560796;178560795;178560794 | chr2:179425523;179425522;179425521 |
Novex-2 | 19573 | 58942;58943;58944 | chr2:178560796;178560795;178560794 | chr2:179425523;179425522;179425521 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | None | None | 0.822 | N | 0.553 | 0.264 | 0.365317461125 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.5928 | likely_pathogenic | 0.5766 | pathogenic | -0.363 | Destabilizing | 0.754 | D | 0.588 | neutral | None | None | None | None | N |
K/C | 0.7776 | likely_pathogenic | 0.7491 | pathogenic | -0.474 | Destabilizing | 0.998 | D | 0.76 | deleterious | None | None | None | None | N |
K/D | 0.8468 | likely_pathogenic | 0.8381 | pathogenic | 0.035 | Stabilizing | 0.956 | D | 0.572 | neutral | None | None | None | None | N |
K/E | 0.318 | likely_benign | 0.3125 | benign | 0.126 | Stabilizing | 0.822 | D | 0.553 | neutral | N | 0.485630331 | None | None | N |
K/F | 0.8553 | likely_pathogenic | 0.8327 | pathogenic | -0.141 | Destabilizing | 0.978 | D | 0.714 | prob.delet. | None | None | None | None | N |
K/G | 0.8353 | likely_pathogenic | 0.8144 | pathogenic | -0.701 | Destabilizing | 0.86 | D | 0.565 | neutral | None | None | None | None | N |
K/H | 0.3908 | ambiguous | 0.3744 | ambiguous | -1.022 | Destabilizing | 0.994 | D | 0.6 | neutral | None | None | None | None | N |
K/I | 0.3463 | ambiguous | 0.3283 | benign | 0.492 | Stabilizing | 0.942 | D | 0.706 | prob.neutral | N | 0.487911737 | None | None | N |
K/L | 0.4348 | ambiguous | 0.4056 | ambiguous | 0.492 | Stabilizing | 0.754 | D | 0.581 | neutral | None | None | None | None | N |
K/M | 0.2718 | likely_benign | 0.2586 | benign | 0.262 | Stabilizing | 0.998 | D | 0.6 | neutral | None | None | None | None | N |
K/N | 0.6911 | likely_pathogenic | 0.6605 | pathogenic | -0.313 | Destabilizing | 0.942 | D | 0.514 | neutral | N | 0.484935996 | None | None | N |
K/P | 0.9779 | likely_pathogenic | 0.977 | pathogenic | 0.238 | Stabilizing | 0.978 | D | 0.603 | neutral | None | None | None | None | N |
K/Q | 0.2146 | likely_benign | 0.1992 | benign | -0.373 | Destabilizing | 0.942 | D | 0.553 | neutral | N | 0.486693515 | None | None | N |
K/R | 0.0909 | likely_benign | 0.0867 | benign | -0.507 | Destabilizing | 0.014 | N | 0.253 | neutral | D | 0.530077954 | None | None | N |
K/S | 0.6748 | likely_pathogenic | 0.6528 | pathogenic | -0.921 | Destabilizing | 0.754 | D | 0.528 | neutral | None | None | None | None | N |
K/T | 0.2389 | likely_benign | 0.2302 | benign | -0.631 | Destabilizing | 0.032 | N | 0.383 | neutral | N | 0.518127377 | None | None | N |
K/V | 0.3269 | likely_benign | 0.3123 | benign | 0.238 | Stabilizing | 0.915 | D | 0.565 | neutral | None | None | None | None | N |
K/W | 0.8531 | likely_pathogenic | 0.8235 | pathogenic | -0.06 | Destabilizing | 0.998 | D | 0.783 | deleterious | None | None | None | None | N |
K/Y | 0.7364 | likely_pathogenic | 0.7068 | pathogenic | 0.239 | Stabilizing | 0.993 | D | 0.684 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.