Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28453 | 85582;85583;85584 | chr2:178560775;178560774;178560773 | chr2:179425502;179425501;179425500 |
N2AB | 26812 | 80659;80660;80661 | chr2:178560775;178560774;178560773 | chr2:179425502;179425501;179425500 |
N2A | 25885 | 77878;77879;77880 | chr2:178560775;178560774;178560773 | chr2:179425502;179425501;179425500 |
N2B | 19388 | 58387;58388;58389 | chr2:178560775;178560774;178560773 | chr2:179425502;179425501;179425500 |
Novex-1 | 19513 | 58762;58763;58764 | chr2:178560775;178560774;178560773 | chr2:179425502;179425501;179425500 |
Novex-2 | 19580 | 58963;58964;58965 | chr2:178560775;178560774;178560773 | chr2:179425502;179425501;179425500 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/S | None | None | 1.0 | N | 0.861 | 0.443 | 0.285698343383 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.1242 | likely_benign | 0.1147 | benign | -1.658 | Destabilizing | 1.0 | D | 0.793 | deleterious | N | 0.49838317 | None | None | N |
P/C | 0.5634 | ambiguous | 0.5193 | ambiguous | -1.051 | Destabilizing | 1.0 | D | 0.88 | deleterious | None | None | None | None | N |
P/D | 0.7987 | likely_pathogenic | 0.7685 | pathogenic | -1.907 | Destabilizing | 1.0 | D | 0.866 | deleterious | None | None | None | None | N |
P/E | 0.5059 | ambiguous | 0.4676 | ambiguous | -1.919 | Destabilizing | 1.0 | D | 0.868 | deleterious | None | None | None | None | N |
P/F | 0.5463 | ambiguous | 0.5023 | ambiguous | -1.317 | Destabilizing | 1.0 | D | 0.897 | deleterious | None | None | None | None | N |
P/G | 0.6013 | likely_pathogenic | 0.5307 | ambiguous | -1.963 | Destabilizing | 1.0 | D | 0.857 | deleterious | None | None | None | None | N |
P/H | 0.3044 | likely_benign | 0.281 | benign | -1.527 | Destabilizing | 1.0 | D | 0.876 | deleterious | None | None | None | None | N |
P/I | 0.3316 | likely_benign | 0.2951 | benign | -0.91 | Destabilizing | 1.0 | D | 0.915 | deleterious | None | None | None | None | N |
P/K | 0.2968 | likely_benign | 0.2851 | benign | -1.394 | Destabilizing | 1.0 | D | 0.869 | deleterious | None | None | None | None | N |
P/L | 0.1465 | likely_benign | 0.1353 | benign | -0.91 | Destabilizing | 1.0 | D | 0.89 | deleterious | N | 0.503016667 | None | None | N |
P/M | 0.3744 | ambiguous | 0.3433 | ambiguous | -0.649 | Destabilizing | 1.0 | D | 0.874 | deleterious | None | None | None | None | N |
P/N | 0.6503 | likely_pathogenic | 0.6086 | pathogenic | -1.152 | Destabilizing | 1.0 | D | 0.905 | deleterious | None | None | None | None | N |
P/Q | 0.2323 | likely_benign | 0.2109 | benign | -1.381 | Destabilizing | 1.0 | D | 0.892 | deleterious | N | 0.482585462 | None | None | N |
P/R | 0.1962 | likely_benign | 0.1878 | benign | -0.818 | Destabilizing | 1.0 | D | 0.907 | deleterious | N | 0.496397302 | None | None | N |
P/S | 0.2637 | likely_benign | 0.2233 | benign | -1.594 | Destabilizing | 1.0 | D | 0.861 | deleterious | N | 0.484787507 | None | None | N |
P/T | 0.2264 | likely_benign | 0.1981 | benign | -1.515 | Destabilizing | 1.0 | D | 0.865 | deleterious | N | 0.499764664 | None | None | N |
P/V | 0.2471 | likely_benign | 0.2231 | benign | -1.127 | Destabilizing | 1.0 | D | 0.867 | deleterious | None | None | None | None | N |
P/W | 0.7665 | likely_pathogenic | 0.7192 | pathogenic | -1.507 | Destabilizing | 1.0 | D | 0.847 | deleterious | None | None | None | None | N |
P/Y | 0.5427 | ambiguous | 0.5052 | ambiguous | -1.257 | Destabilizing | 1.0 | D | 0.907 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.