Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28458 | 85597;85598;85599 | chr2:178560760;178560759;178560758 | chr2:179425487;179425486;179425485 |
N2AB | 26817 | 80674;80675;80676 | chr2:178560760;178560759;178560758 | chr2:179425487;179425486;179425485 |
N2A | 25890 | 77893;77894;77895 | chr2:178560760;178560759;178560758 | chr2:179425487;179425486;179425485 |
N2B | 19393 | 58402;58403;58404 | chr2:178560760;178560759;178560758 | chr2:179425487;179425486;179425485 |
Novex-1 | 19518 | 58777;58778;58779 | chr2:178560760;178560759;178560758 | chr2:179425487;179425486;179425485 |
Novex-2 | 19585 | 58978;58979;58980 | chr2:178560760;178560759;178560758 | chr2:179425487;179425486;179425485 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/P | rs776361284 | -1.94 | 0.994 | N | 0.872 | 0.516 | 0.805270340984 | gnomAD-2.1.1 | 7.15E-06 | None | None | None | None | N | None | 4.14E-05 | 0 | None | 0 | 5.15E-05 | None | 0 | None | 0 | 0 | 0 |
L/P | rs776361284 | -1.94 | 0.994 | N | 0.872 | 0.516 | 0.805270340984 | gnomAD-3.1.2 | 1.31E-05 | None | None | None | None | N | None | 4.83E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
L/P | rs776361284 | -1.94 | 0.994 | N | 0.872 | 0.516 | 0.805270340984 | gnomAD-4.0.0 | 3.09861E-06 | None | None | None | None | N | None | 2.66973E-05 | 0 | None | 0 | 4.46409E-05 | None | 0 | 0 | 0 | 0 | 1.60123E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.7875 | likely_pathogenic | 0.8061 | pathogenic | -2.216 | Highly Destabilizing | 0.916 | D | 0.719 | prob.delet. | None | None | None | None | N |
L/C | 0.8748 | likely_pathogenic | 0.8819 | pathogenic | -1.587 | Destabilizing | 0.999 | D | 0.767 | deleterious | None | None | None | None | N |
L/D | 0.9961 | likely_pathogenic | 0.9964 | pathogenic | -2.332 | Highly Destabilizing | 0.996 | D | 0.872 | deleterious | None | None | None | None | N |
L/E | 0.9749 | likely_pathogenic | 0.9784 | pathogenic | -2.099 | Highly Destabilizing | 0.996 | D | 0.851 | deleterious | None | None | None | None | N |
L/F | 0.4821 | ambiguous | 0.439 | ambiguous | -1.226 | Destabilizing | 0.967 | D | 0.821 | deleterious | N | 0.499020417 | None | None | N |
L/G | 0.9692 | likely_pathogenic | 0.9712 | pathogenic | -2.768 | Highly Destabilizing | 0.987 | D | 0.847 | deleterious | None | None | None | None | N |
L/H | 0.9656 | likely_pathogenic | 0.9696 | pathogenic | -2.314 | Highly Destabilizing | 0.999 | D | 0.849 | deleterious | N | 0.517671331 | None | None | N |
L/I | 0.1211 | likely_benign | 0.1147 | benign | -0.63 | Destabilizing | 0.056 | N | 0.42 | neutral | N | 0.469735997 | None | None | N |
L/K | 0.956 | likely_pathogenic | 0.9662 | pathogenic | -1.59 | Destabilizing | 0.987 | D | 0.824 | deleterious | None | None | None | None | N |
L/M | 0.2284 | likely_benign | 0.218 | benign | -0.729 | Destabilizing | 0.693 | D | 0.644 | neutral | None | None | None | None | N |
L/N | 0.9827 | likely_pathogenic | 0.9842 | pathogenic | -1.92 | Destabilizing | 0.996 | D | 0.871 | deleterious | None | None | None | None | N |
L/P | 0.8147 | likely_pathogenic | 0.8437 | pathogenic | -1.138 | Destabilizing | 0.994 | D | 0.872 | deleterious | N | 0.509947824 | None | None | N |
L/Q | 0.9314 | likely_pathogenic | 0.9431 | pathogenic | -1.744 | Destabilizing | 0.987 | D | 0.853 | deleterious | None | None | None | None | N |
L/R | 0.9313 | likely_pathogenic | 0.9452 | pathogenic | -1.456 | Destabilizing | 0.983 | D | 0.839 | deleterious | D | 0.522444271 | None | None | N |
L/S | 0.9531 | likely_pathogenic | 0.959 | pathogenic | -2.635 | Highly Destabilizing | 0.987 | D | 0.821 | deleterious | None | None | None | None | N |
L/T | 0.8093 | likely_pathogenic | 0.8235 | pathogenic | -2.251 | Highly Destabilizing | 0.975 | D | 0.777 | deleterious | None | None | None | None | N |
L/V | 0.1388 | likely_benign | 0.1331 | benign | -1.138 | Destabilizing | 0.369 | N | 0.745 | deleterious | N | 0.468519702 | None | None | N |
L/W | 0.8714 | likely_pathogenic | 0.8577 | pathogenic | -1.611 | Destabilizing | 0.999 | D | 0.821 | deleterious | None | None | None | None | N |
L/Y | 0.9306 | likely_pathogenic | 0.9294 | pathogenic | -1.279 | Destabilizing | 0.987 | D | 0.791 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.