Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28463 | 85612;85613;85614 | chr2:178560745;178560744;178560743 | chr2:179425472;179425471;179425470 |
N2AB | 26822 | 80689;80690;80691 | chr2:178560745;178560744;178560743 | chr2:179425472;179425471;179425470 |
N2A | 25895 | 77908;77909;77910 | chr2:178560745;178560744;178560743 | chr2:179425472;179425471;179425470 |
N2B | 19398 | 58417;58418;58419 | chr2:178560745;178560744;178560743 | chr2:179425472;179425471;179425470 |
Novex-1 | 19523 | 58792;58793;58794 | chr2:178560745;178560744;178560743 | chr2:179425472;179425471;179425470 |
Novex-2 | 19590 | 58993;58994;58995 | chr2:178560745;178560744;178560743 | chr2:179425472;179425471;179425470 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/F | None | None | 0.988 | N | 0.663 | 0.257 | 0.625243557465 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
L/R | None | None | 0.994 | N | 0.799 | 0.448 | 0.763205773721 | gnomAD-4.0.0 | 1.59144E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85807E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.3476 | ambiguous | 0.3934 | ambiguous | -1.419 | Destabilizing | 0.938 | D | 0.499 | neutral | None | None | None | None | N |
L/C | 0.4196 | ambiguous | 0.4718 | ambiguous | -0.935 | Destabilizing | 1.0 | D | 0.713 | prob.delet. | None | None | None | None | N |
L/D | 0.7852 | likely_pathogenic | 0.8283 | pathogenic | -0.717 | Destabilizing | 0.998 | D | 0.821 | deleterious | None | None | None | None | N |
L/E | 0.4734 | ambiguous | 0.5355 | ambiguous | -0.76 | Destabilizing | 0.995 | D | 0.811 | deleterious | None | None | None | None | N |
L/F | 0.1703 | likely_benign | 0.1885 | benign | -1.25 | Destabilizing | 0.988 | D | 0.663 | neutral | N | 0.489468191 | None | None | N |
L/G | 0.6358 | likely_pathogenic | 0.6931 | pathogenic | -1.685 | Destabilizing | 0.995 | D | 0.809 | deleterious | None | None | None | None | N |
L/H | 0.3461 | ambiguous | 0.4013 | ambiguous | -0.998 | Destabilizing | 0.999 | D | 0.809 | deleterious | N | 0.471661954 | None | None | N |
L/I | 0.0726 | likely_benign | 0.0758 | benign | -0.792 | Destabilizing | 0.825 | D | 0.435 | neutral | N | 0.375486537 | None | None | N |
L/K | 0.284 | likely_benign | 0.3352 | benign | -0.809 | Destabilizing | 0.995 | D | 0.789 | deleterious | None | None | None | None | N |
L/M | 0.128 | likely_benign | 0.1363 | benign | -0.554 | Destabilizing | 0.995 | D | 0.685 | prob.neutral | None | None | None | None | N |
L/N | 0.4954 | ambiguous | 0.5699 | pathogenic | -0.553 | Destabilizing | 0.998 | D | 0.817 | deleterious | None | None | None | None | N |
L/P | 0.3946 | ambiguous | 0.4138 | ambiguous | -0.968 | Destabilizing | 0.998 | D | 0.822 | deleterious | N | 0.470901485 | None | None | N |
L/Q | 0.2284 | likely_benign | 0.2743 | benign | -0.792 | Destabilizing | 0.998 | D | 0.796 | deleterious | None | None | None | None | N |
L/R | 0.2356 | likely_benign | 0.2778 | benign | -0.245 | Destabilizing | 0.994 | D | 0.799 | deleterious | N | 0.462396233 | None | None | N |
L/S | 0.4265 | ambiguous | 0.503 | ambiguous | -1.163 | Destabilizing | 0.995 | D | 0.785 | deleterious | None | None | None | None | N |
L/T | 0.2462 | likely_benign | 0.295 | benign | -1.09 | Destabilizing | 0.991 | D | 0.68 | prob.neutral | None | None | None | None | N |
L/V | 0.0793 | likely_benign | 0.0821 | benign | -0.968 | Destabilizing | 0.067 | N | 0.165 | neutral | N | 0.33573607 | None | None | N |
L/W | 0.3345 | likely_benign | 0.377 | ambiguous | -1.261 | Destabilizing | 1.0 | D | 0.776 | deleterious | None | None | None | None | N |
L/Y | 0.4173 | ambiguous | 0.4656 | ambiguous | -1.013 | Destabilizing | 0.995 | D | 0.769 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.