Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28466 | 85621;85622;85623 | chr2:178560736;178560735;178560734 | chr2:179425463;179425462;179425461 |
N2AB | 26825 | 80698;80699;80700 | chr2:178560736;178560735;178560734 | chr2:179425463;179425462;179425461 |
N2A | 25898 | 77917;77918;77919 | chr2:178560736;178560735;178560734 | chr2:179425463;179425462;179425461 |
N2B | 19401 | 58426;58427;58428 | chr2:178560736;178560735;178560734 | chr2:179425463;179425462;179425461 |
Novex-1 | 19526 | 58801;58802;58803 | chr2:178560736;178560735;178560734 | chr2:179425463;179425462;179425461 |
Novex-2 | 19593 | 59002;59003;59004 | chr2:178560736;178560735;178560734 | chr2:179425463;179425462;179425461 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | rs758571306 | -0.636 | 0.999 | N | 0.48 | 0.169 | 0.377976839388 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.89E-06 | 0 |
E/K | rs878880701 | None | 0.999 | N | 0.568 | 0.381 | None | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.89E-06 | 0 |
E/K | rs878880701 | None | 0.999 | N | 0.568 | 0.381 | None | gnomAD-4.0.0 | 3.42126E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.59782E-06 | 0 | 1.65662E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.3726 | ambiguous | 0.3795 | ambiguous | -0.788 | Destabilizing | 0.999 | D | 0.648 | neutral | N | 0.513131697 | None | None | N |
E/C | 0.9471 | likely_pathogenic | 0.9566 | pathogenic | -0.218 | Destabilizing | 1.0 | D | 0.679 | prob.neutral | None | None | None | None | N |
E/D | 0.267 | likely_benign | 0.2614 | benign | -0.672 | Destabilizing | 0.999 | D | 0.48 | neutral | N | 0.492638995 | None | None | N |
E/F | 0.9283 | likely_pathogenic | 0.9371 | pathogenic | -0.511 | Destabilizing | 1.0 | D | 0.65 | neutral | None | None | None | None | N |
E/G | 0.2193 | likely_benign | 0.2387 | benign | -1.055 | Destabilizing | 1.0 | D | 0.661 | neutral | N | 0.476039593 | None | None | N |
E/H | 0.7447 | likely_pathogenic | 0.7706 | pathogenic | -0.572 | Destabilizing | 1.0 | D | 0.603 | neutral | None | None | None | None | N |
E/I | 0.7765 | likely_pathogenic | 0.7962 | pathogenic | -0.087 | Destabilizing | 1.0 | D | 0.671 | neutral | None | None | None | None | N |
E/K | 0.2263 | likely_benign | 0.2667 | benign | -0.081 | Destabilizing | 0.999 | D | 0.568 | neutral | N | 0.4716715 | None | None | N |
E/L | 0.7079 | likely_pathogenic | 0.7314 | pathogenic | -0.087 | Destabilizing | 1.0 | D | 0.687 | prob.neutral | None | None | None | None | N |
E/M | 0.7431 | likely_pathogenic | 0.763 | pathogenic | 0.25 | Stabilizing | 1.0 | D | 0.601 | neutral | None | None | None | None | N |
E/N | 0.4878 | ambiguous | 0.4784 | ambiguous | -0.477 | Destabilizing | 1.0 | D | 0.665 | neutral | None | None | None | None | N |
E/P | 0.9459 | likely_pathogenic | 0.9671 | pathogenic | -0.3 | Destabilizing | 1.0 | D | 0.665 | neutral | None | None | None | None | N |
E/Q | 0.2234 | likely_benign | 0.2383 | benign | -0.426 | Destabilizing | 1.0 | D | 0.602 | neutral | N | 0.481977848 | None | None | N |
E/R | 0.3651 | ambiguous | 0.4233 | ambiguous | 0.123 | Stabilizing | 1.0 | D | 0.658 | neutral | None | None | None | None | N |
E/S | 0.3882 | ambiguous | 0.3879 | ambiguous | -0.691 | Destabilizing | 0.999 | D | 0.619 | neutral | None | None | None | None | N |
E/T | 0.4366 | ambiguous | 0.4466 | ambiguous | -0.472 | Destabilizing | 1.0 | D | 0.687 | prob.neutral | None | None | None | None | N |
E/V | 0.5338 | ambiguous | 0.5591 | ambiguous | -0.3 | Destabilizing | 1.0 | D | 0.683 | prob.neutral | N | 0.502146018 | None | None | N |
E/W | 0.9469 | likely_pathogenic | 0.9604 | pathogenic | -0.271 | Destabilizing | 1.0 | D | 0.681 | prob.neutral | None | None | None | None | N |
E/Y | 0.8418 | likely_pathogenic | 0.8704 | pathogenic | -0.253 | Destabilizing | 1.0 | D | 0.636 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.