Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28468 | 85627;85628;85629 | chr2:178560730;178560729;178560728 | chr2:179425457;179425456;179425455 |
N2AB | 26827 | 80704;80705;80706 | chr2:178560730;178560729;178560728 | chr2:179425457;179425456;179425455 |
N2A | 25900 | 77923;77924;77925 | chr2:178560730;178560729;178560728 | chr2:179425457;179425456;179425455 |
N2B | 19403 | 58432;58433;58434 | chr2:178560730;178560729;178560728 | chr2:179425457;179425456;179425455 |
Novex-1 | 19528 | 58807;58808;58809 | chr2:178560730;178560729;178560728 | chr2:179425457;179425456;179425455 |
Novex-2 | 19595 | 59008;59009;59010 | chr2:178560730;178560729;178560728 | chr2:179425457;179425456;179425455 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/G | None | None | 0.684 | N | 0.775 | 0.441 | 0.696495078693 | gnomAD-4.0.0 | 1.3685E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 2.31884E-05 | 0 |
C/R | rs1553563147 | None | 0.939 | N | 0.841 | 0.482 | 0.716165656389 | gnomAD-4.0.0 | 2.737E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.59782E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/A | 0.5687 | likely_pathogenic | 0.5687 | pathogenic | -1.529 | Destabilizing | 0.037 | N | 0.316 | neutral | None | None | None | None | N |
C/D | 0.9959 | likely_pathogenic | 0.9966 | pathogenic | -0.973 | Destabilizing | 0.953 | D | 0.835 | deleterious | None | None | None | None | N |
C/E | 0.9972 | likely_pathogenic | 0.9977 | pathogenic | -0.753 | Destabilizing | 0.953 | D | 0.829 | deleterious | None | None | None | None | N |
C/F | 0.543 | ambiguous | 0.6118 | pathogenic | -1.126 | Destabilizing | 0.884 | D | 0.822 | deleterious | N | 0.481974167 | None | None | N |
C/G | 0.4557 | ambiguous | 0.4779 | ambiguous | -1.888 | Destabilizing | 0.684 | D | 0.775 | deleterious | N | 0.508347309 | None | None | N |
C/H | 0.9869 | likely_pathogenic | 0.9903 | pathogenic | -2.223 | Highly Destabilizing | 0.996 | D | 0.815 | deleterious | None | None | None | None | N |
C/I | 0.5555 | ambiguous | 0.5355 | ambiguous | -0.576 | Destabilizing | 0.59 | D | 0.796 | deleterious | None | None | None | None | N |
C/K | 0.997 | likely_pathogenic | 0.9976 | pathogenic | -0.64 | Destabilizing | 0.91 | D | 0.803 | deleterious | None | None | None | None | N |
C/L | 0.5679 | likely_pathogenic | 0.5816 | pathogenic | -0.576 | Destabilizing | 0.17 | N | 0.677 | prob.neutral | None | None | None | None | N |
C/M | 0.7561 | likely_pathogenic | 0.765 | pathogenic | -0.008 | Destabilizing | 0.206 | N | 0.579 | neutral | None | None | None | None | N |
C/N | 0.9802 | likely_pathogenic | 0.9844 | pathogenic | -1.195 | Destabilizing | 0.953 | D | 0.841 | deleterious | None | None | None | None | N |
C/P | 0.9964 | likely_pathogenic | 0.9971 | pathogenic | -0.869 | Destabilizing | 0.953 | D | 0.841 | deleterious | None | None | None | None | N |
C/Q | 0.9888 | likely_pathogenic | 0.9914 | pathogenic | -0.781 | Destabilizing | 0.953 | D | 0.843 | deleterious | None | None | None | None | N |
C/R | 0.9776 | likely_pathogenic | 0.9828 | pathogenic | -1.112 | Destabilizing | 0.939 | D | 0.841 | deleterious | N | 0.520717572 | None | None | N |
C/S | 0.7699 | likely_pathogenic | 0.7909 | pathogenic | -1.533 | Destabilizing | 0.521 | D | 0.771 | deleterious | N | 0.502106338 | None | None | N |
C/T | 0.8325 | likely_pathogenic | 0.8315 | pathogenic | -1.104 | Destabilizing | 0.742 | D | 0.787 | deleterious | None | None | None | None | N |
C/V | 0.4503 | ambiguous | 0.4256 | ambiguous | -0.869 | Destabilizing | 0.59 | D | 0.734 | prob.delet. | None | None | None | None | N |
C/W | 0.9607 | likely_pathogenic | 0.9666 | pathogenic | -1.415 | Destabilizing | 0.994 | D | 0.791 | deleterious | N | 0.520717572 | None | None | N |
C/Y | 0.8406 | likely_pathogenic | 0.8717 | pathogenic | -1.19 | Destabilizing | 0.939 | D | 0.805 | deleterious | N | 0.520210593 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.