Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28470 | 85633;85634;85635 | chr2:178560724;178560723;178560722 | chr2:179425451;179425450;179425449 |
N2AB | 26829 | 80710;80711;80712 | chr2:178560724;178560723;178560722 | chr2:179425451;179425450;179425449 |
N2A | 25902 | 77929;77930;77931 | chr2:178560724;178560723;178560722 | chr2:179425451;179425450;179425449 |
N2B | 19405 | 58438;58439;58440 | chr2:178560724;178560723;178560722 | chr2:179425451;179425450;179425449 |
Novex-1 | 19530 | 58813;58814;58815 | chr2:178560724;178560723;178560722 | chr2:179425451;179425450;179425449 |
Novex-2 | 19597 | 59014;59015;59016 | chr2:178560724;178560723;178560722 | chr2:179425451;179425450;179425449 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/V | None | None | 0.014 | N | 0.343 | 0.214 | 0.287603790349 | gnomAD-4.0.0 | 1.36855E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79893E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.9026 | likely_pathogenic | 0.8959 | pathogenic | -2.414 | Highly Destabilizing | 0.754 | D | 0.731 | prob.delet. | None | None | None | None | N |
L/C | 0.8802 | likely_pathogenic | 0.8604 | pathogenic | -1.96 | Destabilizing | 0.994 | D | 0.766 | deleterious | None | None | None | None | N |
L/D | 0.9989 | likely_pathogenic | 0.9989 | pathogenic | -2.891 | Highly Destabilizing | 0.993 | D | 0.915 | deleterious | None | None | None | None | N |
L/E | 0.9935 | likely_pathogenic | 0.9939 | pathogenic | -2.584 | Highly Destabilizing | 0.978 | D | 0.912 | deleterious | None | None | None | None | N |
L/F | 0.4819 | ambiguous | 0.4133 | ambiguous | -1.487 | Destabilizing | 0.942 | D | 0.668 | neutral | D | 0.527404567 | None | None | N |
L/G | 0.9856 | likely_pathogenic | 0.9845 | pathogenic | -3.035 | Highly Destabilizing | 0.978 | D | 0.906 | deleterious | None | None | None | None | N |
L/H | 0.9823 | likely_pathogenic | 0.9805 | pathogenic | -2.824 | Highly Destabilizing | 0.997 | D | 0.903 | deleterious | D | 0.563412494 | None | None | N |
L/I | 0.096 | likely_benign | 0.0862 | benign | -0.578 | Destabilizing | 0.014 | N | 0.302 | neutral | N | 0.47987207 | None | None | N |
L/K | 0.985 | likely_pathogenic | 0.9862 | pathogenic | -1.77 | Destabilizing | 0.978 | D | 0.875 | deleterious | None | None | None | None | N |
L/M | 0.3573 | ambiguous | 0.302 | benign | -0.829 | Destabilizing | 0.956 | D | 0.641 | neutral | None | None | None | None | N |
L/N | 0.9939 | likely_pathogenic | 0.994 | pathogenic | -2.364 | Highly Destabilizing | 0.993 | D | 0.923 | deleterious | None | None | None | None | N |
L/P | 0.9851 | likely_pathogenic | 0.986 | pathogenic | -1.175 | Destabilizing | 0.99 | D | 0.919 | deleterious | D | 0.563412494 | None | None | N |
L/Q | 0.977 | likely_pathogenic | 0.9755 | pathogenic | -2.04 | Highly Destabilizing | 0.993 | D | 0.908 | deleterious | None | None | None | None | N |
L/R | 0.9715 | likely_pathogenic | 0.9704 | pathogenic | -1.845 | Destabilizing | 0.971 | D | 0.893 | deleterious | D | 0.563412494 | None | None | N |
L/S | 0.9856 | likely_pathogenic | 0.9843 | pathogenic | -3.044 | Highly Destabilizing | 0.956 | D | 0.855 | deleterious | None | None | None | None | N |
L/T | 0.9428 | likely_pathogenic | 0.9426 | pathogenic | -2.56 | Highly Destabilizing | 0.956 | D | 0.76 | deleterious | None | None | None | None | N |
L/V | 0.1321 | likely_benign | 0.1139 | benign | -1.175 | Destabilizing | 0.014 | N | 0.343 | neutral | N | 0.479437088 | None | None | N |
L/W | 0.9459 | likely_pathogenic | 0.9322 | pathogenic | -1.924 | Destabilizing | 0.998 | D | 0.846 | deleterious | None | None | None | None | N |
L/Y | 0.9474 | likely_pathogenic | 0.9357 | pathogenic | -1.605 | Destabilizing | 0.978 | D | 0.758 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.