Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28483 | 85672;85673;85674 | chr2:178560685;178560684;178560683 | chr2:179425412;179425411;179425410 |
N2AB | 26842 | 80749;80750;80751 | chr2:178560685;178560684;178560683 | chr2:179425412;179425411;179425410 |
N2A | 25915 | 77968;77969;77970 | chr2:178560685;178560684;178560683 | chr2:179425412;179425411;179425410 |
N2B | 19418 | 58477;58478;58479 | chr2:178560685;178560684;178560683 | chr2:179425412;179425411;179425410 |
Novex-1 | 19543 | 58852;58853;58854 | chr2:178560685;178560684;178560683 | chr2:179425412;179425411;179425410 |
Novex-2 | 19610 | 59053;59054;59055 | chr2:178560685;178560684;178560683 | chr2:179425412;179425411;179425410 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/V | None | None | 0.003 | N | 0.179 | 0.124 | 0.419461527279 | gnomAD-4.0.0 | 1.59159E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43283E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.688 | likely_pathogenic | 0.6685 | pathogenic | -2.439 | Highly Destabilizing | 0.415 | N | 0.622 | neutral | None | None | None | None | N |
I/C | 0.9062 | likely_pathogenic | 0.9027 | pathogenic | -1.439 | Destabilizing | 0.989 | D | 0.74 | deleterious | None | None | None | None | N |
I/D | 0.9793 | likely_pathogenic | 0.9818 | pathogenic | -2.589 | Highly Destabilizing | 0.923 | D | 0.828 | deleterious | None | None | None | None | N |
I/E | 0.9604 | likely_pathogenic | 0.9645 | pathogenic | -2.491 | Highly Destabilizing | 0.923 | D | 0.833 | deleterious | None | None | None | None | N |
I/F | 0.6979 | likely_pathogenic | 0.6784 | pathogenic | -1.612 | Destabilizing | 0.901 | D | 0.709 | prob.delet. | D | 0.535399376 | None | None | N |
I/G | 0.9558 | likely_pathogenic | 0.958 | pathogenic | -2.872 | Highly Destabilizing | 0.858 | D | 0.82 | deleterious | None | None | None | None | N |
I/H | 0.9665 | likely_pathogenic | 0.9678 | pathogenic | -2.273 | Highly Destabilizing | 0.996 | D | 0.812 | deleterious | None | None | None | None | N |
I/K | 0.9034 | likely_pathogenic | 0.9126 | pathogenic | -1.875 | Destabilizing | 0.923 | D | 0.835 | deleterious | None | None | None | None | N |
I/L | 0.3056 | likely_benign | 0.2881 | benign | -1.235 | Destabilizing | 0.19 | N | 0.443 | neutral | N | 0.499342223 | None | None | N |
I/M | 0.2799 | likely_benign | 0.2682 | benign | -0.869 | Destabilizing | 0.959 | D | 0.673 | neutral | D | 0.556038526 | None | None | N |
I/N | 0.823 | likely_pathogenic | 0.8549 | pathogenic | -1.827 | Destabilizing | 0.901 | D | 0.837 | deleterious | D | 0.530554438 | None | None | N |
I/P | 0.8566 | likely_pathogenic | 0.8696 | pathogenic | -1.613 | Destabilizing | 0.961 | D | 0.842 | deleterious | None | None | None | None | N |
I/Q | 0.9431 | likely_pathogenic | 0.9459 | pathogenic | -1.901 | Destabilizing | 0.923 | D | 0.845 | deleterious | None | None | None | None | N |
I/R | 0.8511 | likely_pathogenic | 0.8657 | pathogenic | -1.326 | Destabilizing | 0.923 | D | 0.85 | deleterious | None | None | None | None | N |
I/S | 0.767 | likely_pathogenic | 0.7813 | pathogenic | -2.421 | Highly Destabilizing | 0.075 | N | 0.479 | neutral | D | 0.54493571 | None | None | N |
I/T | 0.3416 | ambiguous | 0.3311 | benign | -2.208 | Highly Destabilizing | 0.565 | D | 0.695 | prob.neutral | D | 0.52979397 | None | None | N |
I/V | 0.0859 | likely_benign | 0.079 | benign | -1.613 | Destabilizing | 0.003 | N | 0.179 | neutral | N | 0.503669639 | None | None | N |
I/W | 0.9833 | likely_pathogenic | 0.9792 | pathogenic | -1.91 | Destabilizing | 0.996 | D | 0.815 | deleterious | None | None | None | None | N |
I/Y | 0.94 | likely_pathogenic | 0.9425 | pathogenic | -1.702 | Destabilizing | 0.961 | D | 0.777 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.