Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28486 | 85681;85682;85683 | chr2:178560676;178560675;178560674 | chr2:179425403;179425402;179425401 |
N2AB | 26845 | 80758;80759;80760 | chr2:178560676;178560675;178560674 | chr2:179425403;179425402;179425401 |
N2A | 25918 | 77977;77978;77979 | chr2:178560676;178560675;178560674 | chr2:179425403;179425402;179425401 |
N2B | 19421 | 58486;58487;58488 | chr2:178560676;178560675;178560674 | chr2:179425403;179425402;179425401 |
Novex-1 | 19546 | 58861;58862;58863 | chr2:178560676;178560675;178560674 | chr2:179425403;179425402;179425401 |
Novex-2 | 19613 | 59062;59063;59064 | chr2:178560676;178560675;178560674 | chr2:179425403;179425402;179425401 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/C | None | None | 1.0 | D | 0.883 | 0.873 | 0.903155408053 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.983 | likely_pathogenic | 0.9837 | pathogenic | -3.485 | Highly Destabilizing | 1.0 | D | 0.82 | deleterious | None | None | None | None | N |
Y/C | 0.6824 | likely_pathogenic | 0.6843 | pathogenic | -1.503 | Destabilizing | 1.0 | D | 0.883 | deleterious | D | 0.664192256 | None | None | N |
Y/D | 0.9733 | likely_pathogenic | 0.9782 | pathogenic | -3.709 | Highly Destabilizing | 1.0 | D | 0.907 | deleterious | D | 0.66439406 | None | None | N |
Y/E | 0.9941 | likely_pathogenic | 0.9953 | pathogenic | -3.496 | Highly Destabilizing | 1.0 | D | 0.907 | deleterious | None | None | None | None | N |
Y/F | 0.1467 | likely_benign | 0.1416 | benign | -1.61 | Destabilizing | 0.999 | D | 0.655 | neutral | D | 0.551179868 | None | None | N |
Y/G | 0.9615 | likely_pathogenic | 0.964 | pathogenic | -3.863 | Highly Destabilizing | 1.0 | D | 0.916 | deleterious | None | None | None | None | N |
Y/H | 0.8799 | likely_pathogenic | 0.8809 | pathogenic | -2.728 | Highly Destabilizing | 1.0 | D | 0.795 | deleterious | D | 0.663788648 | None | None | N |
Y/I | 0.8959 | likely_pathogenic | 0.8962 | pathogenic | -2.186 | Highly Destabilizing | 1.0 | D | 0.861 | deleterious | None | None | None | None | N |
Y/K | 0.9905 | likely_pathogenic | 0.9925 | pathogenic | -2.448 | Highly Destabilizing | 1.0 | D | 0.903 | deleterious | None | None | None | None | N |
Y/L | 0.8201 | likely_pathogenic | 0.7989 | pathogenic | -2.186 | Highly Destabilizing | 0.999 | D | 0.741 | deleterious | None | None | None | None | N |
Y/M | 0.9576 | likely_pathogenic | 0.9531 | pathogenic | -1.715 | Destabilizing | 1.0 | D | 0.845 | deleterious | None | None | None | None | N |
Y/N | 0.9066 | likely_pathogenic | 0.9169 | pathogenic | -3.225 | Highly Destabilizing | 1.0 | D | 0.893 | deleterious | D | 0.664192256 | None | None | N |
Y/P | 0.9948 | likely_pathogenic | 0.9956 | pathogenic | -2.639 | Highly Destabilizing | 1.0 | D | 0.935 | deleterious | None | None | None | None | N |
Y/Q | 0.9862 | likely_pathogenic | 0.9876 | pathogenic | -2.948 | Highly Destabilizing | 1.0 | D | 0.843 | deleterious | None | None | None | None | N |
Y/R | 0.964 | likely_pathogenic | 0.9707 | pathogenic | -2.302 | Highly Destabilizing | 1.0 | D | 0.895 | deleterious | None | None | None | None | N |
Y/S | 0.9248 | likely_pathogenic | 0.927 | pathogenic | -3.454 | Highly Destabilizing | 1.0 | D | 0.905 | deleterious | D | 0.664192256 | None | None | N |
Y/T | 0.9742 | likely_pathogenic | 0.9762 | pathogenic | -3.129 | Highly Destabilizing | 1.0 | D | 0.907 | deleterious | None | None | None | None | N |
Y/V | 0.8592 | likely_pathogenic | 0.8594 | pathogenic | -2.639 | Highly Destabilizing | 1.0 | D | 0.785 | deleterious | None | None | None | None | N |
Y/W | 0.71 | likely_pathogenic | 0.6975 | pathogenic | -0.844 | Destabilizing | 1.0 | D | 0.783 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.