Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28500 | 85723;85724;85725 | chr2:178560634;178560633;178560632 | chr2:179425361;179425360;179425359 |
N2AB | 26859 | 80800;80801;80802 | chr2:178560634;178560633;178560632 | chr2:179425361;179425360;179425359 |
N2A | 25932 | 78019;78020;78021 | chr2:178560634;178560633;178560632 | chr2:179425361;179425360;179425359 |
N2B | 19435 | 58528;58529;58530 | chr2:178560634;178560633;178560632 | chr2:179425361;179425360;179425359 |
Novex-1 | 19560 | 58903;58904;58905 | chr2:178560634;178560633;178560632 | chr2:179425361;179425360;179425359 |
Novex-2 | 19627 | 59104;59105;59106 | chr2:178560634;178560633;178560632 | chr2:179425361;179425360;179425359 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/V | rs752991005 | -0.244 | 0.08 | N | 0.239 | 0.061 | 0.536988229258 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | I | None | 6.47E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
I/V | rs752991005 | -0.244 | 0.08 | N | 0.239 | 0.061 | 0.536988229258 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
I/V | rs752991005 | -0.244 | 0.08 | N | 0.239 | 0.061 | 0.536988229258 | gnomAD-4.0.0 | 6.57151E-06 | None | None | None | None | I | None | 2.41255E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.2234 | likely_benign | 0.2631 | benign | -1.024 | Destabilizing | 0.345 | N | 0.429 | neutral | None | None | None | None | I |
I/C | 0.5202 | ambiguous | 0.601 | pathogenic | -0.663 | Destabilizing | 0.991 | D | 0.47 | neutral | None | None | None | None | I |
I/D | 0.5694 | likely_pathogenic | 0.6461 | pathogenic | -0.521 | Destabilizing | 0.901 | D | 0.489 | neutral | None | None | None | None | I |
I/E | 0.4457 | ambiguous | 0.5086 | ambiguous | -0.597 | Destabilizing | 0.561 | D | 0.501 | neutral | None | None | None | None | I |
I/F | 0.144 | likely_benign | 0.1567 | benign | -0.867 | Destabilizing | 0.818 | D | 0.427 | neutral | None | None | None | None | I |
I/G | 0.4923 | ambiguous | 0.5722 | pathogenic | -1.242 | Destabilizing | 0.561 | D | 0.505 | neutral | None | None | None | None | I |
I/H | 0.3601 | ambiguous | 0.4227 | ambiguous | -0.462 | Destabilizing | 0.991 | D | 0.461 | neutral | None | None | None | None | I |
I/K | 0.2551 | likely_benign | 0.2912 | benign | -0.638 | Destabilizing | 0.326 | N | 0.473 | neutral | N | 0.442076888 | None | None | I |
I/L | 0.0834 | likely_benign | 0.0871 | benign | -0.548 | Destabilizing | None | N | 0.143 | neutral | N | 0.418605383 | None | None | I |
I/M | 0.103 | likely_benign | 0.1109 | benign | -0.412 | Destabilizing | 0.772 | D | 0.459 | neutral | N | 0.494025861 | None | None | I |
I/N | 0.196 | likely_benign | 0.2343 | benign | -0.383 | Destabilizing | 0.901 | D | 0.501 | neutral | None | None | None | None | I |
I/P | 0.4197 | ambiguous | 0.5243 | ambiguous | -0.673 | Destabilizing | 0.004 | N | 0.341 | neutral | None | None | None | None | I |
I/Q | 0.3034 | likely_benign | 0.3614 | ambiguous | -0.642 | Destabilizing | 0.818 | D | 0.503 | neutral | None | None | None | None | I |
I/R | 0.1806 | likely_benign | 0.2055 | benign | 0.004 | Stabilizing | 0.003 | N | 0.378 | neutral | N | 0.461932086 | None | None | I |
I/S | 0.2098 | likely_benign | 0.2583 | benign | -0.889 | Destabilizing | 0.561 | D | 0.443 | neutral | None | None | None | None | I |
I/T | 0.1823 | likely_benign | 0.2197 | benign | -0.858 | Destabilizing | 0.491 | N | 0.42 | neutral | N | 0.396861887 | None | None | I |
I/V | 0.0629 | likely_benign | 0.0653 | benign | -0.673 | Destabilizing | 0.08 | N | 0.239 | neutral | N | 0.396112525 | None | None | I |
I/W | 0.6969 | likely_pathogenic | 0.7322 | pathogenic | -0.87 | Destabilizing | 0.991 | D | 0.497 | neutral | None | None | None | None | I |
I/Y | 0.3959 | ambiguous | 0.4379 | ambiguous | -0.645 | Destabilizing | 0.901 | D | 0.483 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.