Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28502 | 85729;85730;85731 | chr2:178560628;178560627;178560626 | chr2:179425355;179425354;179425353 |
N2AB | 26861 | 80806;80807;80808 | chr2:178560628;178560627;178560626 | chr2:179425355;179425354;179425353 |
N2A | 25934 | 78025;78026;78027 | chr2:178560628;178560627;178560626 | chr2:179425355;179425354;179425353 |
N2B | 19437 | 58534;58535;58536 | chr2:178560628;178560627;178560626 | chr2:179425355;179425354;179425353 |
Novex-1 | 19562 | 58909;58910;58911 | chr2:178560628;178560627;178560626 | chr2:179425355;179425354;179425353 |
Novex-2 | 19629 | 59110;59111;59112 | chr2:178560628;178560627;178560626 | chr2:179425355;179425354;179425353 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | None | None | 0.92 | N | 0.505 | 0.191 | 0.402471007487 | gnomAD-4.0.0 | 3.18351E-06 | None | None | None | None | I | None | 0 | 4.57415E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1363 | likely_benign | 0.1445 | benign | -0.454 | Destabilizing | 0.134 | N | 0.268 | neutral | N | 0.397846109 | None | None | I |
E/C | 0.6768 | likely_pathogenic | 0.7278 | pathogenic | -0.11 | Destabilizing | 0.999 | D | 0.56 | neutral | None | None | None | None | I |
E/D | 0.1597 | likely_benign | 0.1703 | benign | -0.599 | Destabilizing | 0.959 | D | 0.357 | neutral | N | 0.429745096 | None | None | I |
E/F | 0.6982 | likely_pathogenic | 0.7276 | pathogenic | -0.124 | Destabilizing | 0.884 | D | 0.552 | neutral | None | None | None | None | I |
E/G | 0.1797 | likely_benign | 0.1748 | benign | -0.733 | Destabilizing | 0.92 | D | 0.505 | neutral | N | 0.439578088 | None | None | I |
E/H | 0.3235 | likely_benign | 0.3491 | ambiguous | -0.144 | Destabilizing | 0.982 | D | 0.442 | neutral | None | None | None | None | I |
E/I | 0.3842 | ambiguous | 0.4279 | ambiguous | 0.273 | Stabilizing | 0.991 | D | 0.561 | neutral | None | None | None | None | I |
E/K | 0.1 | likely_benign | 0.0985 | benign | 0.117 | Stabilizing | 0.959 | D | 0.375 | neutral | N | 0.499605039 | None | None | I |
E/L | 0.3782 | ambiguous | 0.4087 | ambiguous | 0.273 | Stabilizing | 0.939 | D | 0.511 | neutral | None | None | None | None | I |
E/M | 0.4333 | ambiguous | 0.4669 | ambiguous | 0.451 | Stabilizing | 0.999 | D | 0.548 | neutral | None | None | None | None | I |
E/N | 0.2645 | likely_benign | 0.2811 | benign | -0.332 | Destabilizing | 0.997 | D | 0.411 | neutral | None | None | None | None | I |
E/P | 0.6963 | likely_pathogenic | 0.7268 | pathogenic | 0.053 | Stabilizing | 0.991 | D | 0.523 | neutral | None | None | None | None | I |
E/Q | 0.1126 | likely_benign | 0.1157 | benign | -0.242 | Destabilizing | 0.986 | D | 0.416 | neutral | N | 0.507320446 | None | None | I |
E/R | 0.1692 | likely_benign | 0.1668 | benign | 0.335 | Stabilizing | 0.991 | D | 0.411 | neutral | None | None | None | None | I |
E/S | 0.1721 | likely_benign | 0.179 | benign | -0.516 | Destabilizing | 0.884 | D | 0.357 | neutral | None | None | None | None | I |
E/T | 0.1883 | likely_benign | 0.214 | benign | -0.285 | Destabilizing | 0.939 | D | 0.485 | neutral | None | None | None | None | I |
E/V | 0.2072 | likely_benign | 0.2334 | benign | 0.053 | Stabilizing | 0.92 | D | 0.507 | neutral | N | 0.497066167 | None | None | I |
E/W | 0.8551 | likely_pathogenic | 0.8617 | pathogenic | 0.077 | Stabilizing | 0.998 | D | 0.558 | neutral | None | None | None | None | I |
E/Y | 0.547 | ambiguous | 0.5804 | pathogenic | 0.133 | Stabilizing | 0.079 | N | 0.287 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.