Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28510 | 85753;85754;85755 | chr2:178560604;178560603;178560602 | chr2:179425331;179425330;179425329 |
N2AB | 26869 | 80830;80831;80832 | chr2:178560604;178560603;178560602 | chr2:179425331;179425330;179425329 |
N2A | 25942 | 78049;78050;78051 | chr2:178560604;178560603;178560602 | chr2:179425331;179425330;179425329 |
N2B | 19445 | 58558;58559;58560 | chr2:178560604;178560603;178560602 | chr2:179425331;179425330;179425329 |
Novex-1 | 19570 | 58933;58934;58935 | chr2:178560604;178560603;178560602 | chr2:179425331;179425330;179425329 |
Novex-2 | 19637 | 59134;59135;59136 | chr2:178560604;178560603;178560602 | chr2:179425331;179425330;179425329 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/Y | None | None | 1.0 | N | 0.855 | 0.454 | 0.652629836549 | gnomAD-4.0.0 | 1.20033E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.31251E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/A | 0.5121 | ambiguous | 0.4877 | ambiguous | -1.596 | Destabilizing | 0.998 | D | 0.604 | neutral | None | None | None | None | N |
C/D | 0.9183 | likely_pathogenic | 0.9008 | pathogenic | 0.17 | Stabilizing | 1.0 | D | 0.846 | deleterious | None | None | None | None | N |
C/E | 0.9116 | likely_pathogenic | 0.8953 | pathogenic | 0.307 | Stabilizing | 1.0 | D | 0.875 | deleterious | None | None | None | None | N |
C/F | 0.1836 | likely_benign | 0.1806 | benign | -1.034 | Destabilizing | 1.0 | D | 0.851 | deleterious | N | 0.443711684 | None | None | N |
C/G | 0.3542 | ambiguous | 0.322 | benign | -1.915 | Destabilizing | 1.0 | D | 0.8 | deleterious | N | 0.496296668 | None | None | N |
C/H | 0.5648 | likely_pathogenic | 0.5534 | ambiguous | -1.807 | Destabilizing | 1.0 | D | 0.867 | deleterious | None | None | None | None | N |
C/I | 0.4774 | ambiguous | 0.439 | ambiguous | -0.769 | Destabilizing | 1.0 | D | 0.753 | deleterious | None | None | None | None | N |
C/K | 0.8231 | likely_pathogenic | 0.8023 | pathogenic | -0.436 | Destabilizing | 1.0 | D | 0.837 | deleterious | None | None | None | None | N |
C/L | 0.3849 | ambiguous | 0.3668 | ambiguous | -0.769 | Destabilizing | 0.999 | D | 0.639 | neutral | None | None | None | None | N |
C/M | 0.6333 | likely_pathogenic | 0.6239 | pathogenic | 0.015 | Stabilizing | 1.0 | D | 0.816 | deleterious | None | None | None | None | N |
C/N | 0.7766 | likely_pathogenic | 0.7623 | pathogenic | -0.666 | Destabilizing | 1.0 | D | 0.875 | deleterious | None | None | None | None | N |
C/P | 0.9852 | likely_pathogenic | 0.9819 | pathogenic | -1.019 | Destabilizing | 1.0 | D | 0.874 | deleterious | None | None | None | None | N |
C/Q | 0.7246 | likely_pathogenic | 0.6927 | pathogenic | -0.428 | Destabilizing | 1.0 | D | 0.877 | deleterious | None | None | None | None | N |
C/R | 0.4841 | ambiguous | 0.4447 | ambiguous | -0.506 | Destabilizing | 1.0 | D | 0.877 | deleterious | N | 0.507817557 | None | None | N |
C/S | 0.4731 | ambiguous | 0.4485 | ambiguous | -1.228 | Destabilizing | 1.0 | D | 0.755 | deleterious | N | 0.484686873 | None | None | N |
C/T | 0.5869 | likely_pathogenic | 0.5489 | ambiguous | -0.88 | Destabilizing | 1.0 | D | 0.752 | deleterious | None | None | None | None | N |
C/V | 0.4233 | ambiguous | 0.3907 | ambiguous | -1.019 | Destabilizing | 0.999 | D | 0.665 | neutral | None | None | None | None | N |
C/W | 0.5196 | ambiguous | 0.4836 | ambiguous | -1.024 | Destabilizing | 1.0 | D | 0.84 | deleterious | N | 0.475723651 | None | None | N |
C/Y | 0.266 | likely_benign | 0.2657 | benign | -0.969 | Destabilizing | 1.0 | D | 0.855 | deleterious | N | 0.412289912 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.