Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28514 | 85765;85766;85767 | chr2:178560592;178560591;178560590 | chr2:179425319;179425318;179425317 |
N2AB | 26873 | 80842;80843;80844 | chr2:178560592;178560591;178560590 | chr2:179425319;179425318;179425317 |
N2A | 25946 | 78061;78062;78063 | chr2:178560592;178560591;178560590 | chr2:179425319;179425318;179425317 |
N2B | 19449 | 58570;58571;58572 | chr2:178560592;178560591;178560590 | chr2:179425319;179425318;179425317 |
Novex-1 | 19574 | 58945;58946;58947 | chr2:178560592;178560591;178560590 | chr2:179425319;179425318;179425317 |
Novex-2 | 19641 | 59146;59147;59148 | chr2:178560592;178560591;178560590 | chr2:179425319;179425318;179425317 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | None | None | 0.967 | N | 0.492 | 0.204 | 0.159798565429 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
K/Q | rs1401382571 | 0.248 | 0.967 | N | 0.561 | 0.317 | 0.221734844693 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.61E-05 | None | 0 | None | 0 | 0 | 0 |
K/Q | rs1401382571 | 0.248 | 0.967 | N | 0.561 | 0.317 | 0.221734844693 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 1.93199E-04 | None | 0 | 0 | 0 | 0 | 0 |
K/Q | rs1401382571 | 0.248 | 0.967 | N | 0.561 | 0.317 | 0.221734844693 | gnomAD-4.0.0 | 6.57134E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 1.93199E-04 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.521 | ambiguous | 0.6424 | pathogenic | 0.094 | Stabilizing | 0.916 | D | 0.501 | neutral | None | None | None | None | N |
K/C | 0.7442 | likely_pathogenic | 0.8395 | pathogenic | -0.309 | Destabilizing | 0.999 | D | 0.666 | neutral | None | None | None | None | N |
K/D | 0.6462 | likely_pathogenic | 0.7607 | pathogenic | -0.112 | Destabilizing | 0.975 | D | 0.509 | neutral | None | None | None | None | N |
K/E | 0.4018 | ambiguous | 0.5191 | ambiguous | -0.109 | Destabilizing | 0.892 | D | 0.522 | neutral | N | 0.468139554 | None | None | N |
K/F | 0.92 | likely_pathogenic | 0.9507 | pathogenic | -0.143 | Destabilizing | 0.987 | D | 0.624 | neutral | None | None | None | None | N |
K/G | 0.3709 | ambiguous | 0.4924 | ambiguous | -0.075 | Destabilizing | 0.916 | D | 0.475 | neutral | None | None | None | None | N |
K/H | 0.324 | likely_benign | 0.3992 | ambiguous | -0.186 | Destabilizing | 0.073 | N | 0.44 | neutral | None | None | None | None | N |
K/I | 0.8259 | likely_pathogenic | 0.8824 | pathogenic | 0.46 | Stabilizing | 0.987 | D | 0.623 | neutral | None | None | None | None | N |
K/L | 0.6587 | likely_pathogenic | 0.746 | pathogenic | 0.46 | Stabilizing | 0.975 | D | 0.463 | neutral | None | None | None | None | N |
K/M | 0.5475 | ambiguous | 0.646 | pathogenic | 0.064 | Stabilizing | 0.999 | D | 0.51 | neutral | N | 0.507198901 | None | None | N |
K/N | 0.4951 | ambiguous | 0.6004 | pathogenic | 0.136 | Stabilizing | 0.967 | D | 0.492 | neutral | N | 0.476765465 | None | None | N |
K/P | 0.8427 | likely_pathogenic | 0.8956 | pathogenic | 0.364 | Stabilizing | 0.996 | D | 0.52 | neutral | None | None | None | None | N |
K/Q | 0.231 | likely_benign | 0.2873 | benign | 0.001 | Stabilizing | 0.967 | D | 0.561 | neutral | N | 0.494828637 | None | None | N |
K/R | 0.0833 | likely_benign | 0.0893 | benign | -0.011 | Destabilizing | 0.025 | N | 0.273 | neutral | N | 0.470554356 | None | None | N |
K/S | 0.506 | ambiguous | 0.6285 | pathogenic | -0.265 | Destabilizing | 0.916 | D | 0.509 | neutral | None | None | None | None | N |
K/T | 0.431 | ambiguous | 0.5503 | ambiguous | -0.13 | Destabilizing | 0.967 | D | 0.505 | neutral | N | 0.495335616 | None | None | N |
K/V | 0.703 | likely_pathogenic | 0.784 | pathogenic | 0.364 | Stabilizing | 0.987 | D | 0.543 | neutral | None | None | None | None | N |
K/W | 0.8539 | likely_pathogenic | 0.8985 | pathogenic | -0.226 | Destabilizing | 0.999 | D | 0.681 | prob.neutral | None | None | None | None | N |
K/Y | 0.748 | likely_pathogenic | 0.8204 | pathogenic | 0.13 | Stabilizing | 0.95 | D | 0.56 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.