Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28516 | 85771;85772;85773 | chr2:178560586;178560585;178560584 | chr2:179425313;179425312;179425311 |
N2AB | 26875 | 80848;80849;80850 | chr2:178560586;178560585;178560584 | chr2:179425313;179425312;179425311 |
N2A | 25948 | 78067;78068;78069 | chr2:178560586;178560585;178560584 | chr2:179425313;179425312;179425311 |
N2B | 19451 | 58576;58577;58578 | chr2:178560586;178560585;178560584 | chr2:179425313;179425312;179425311 |
Novex-1 | 19576 | 58951;58952;58953 | chr2:178560586;178560585;178560584 | chr2:179425313;179425312;179425311 |
Novex-2 | 19643 | 59152;59153;59154 | chr2:178560586;178560585;178560584 | chr2:179425313;179425312;179425311 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/F | rs13026702 | None | 0.998 | N | 0.708 | 0.378 | 0.489036454283 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
L/F | rs13026702 | None | 0.998 | N | 0.708 | 0.378 | 0.489036454283 | gnomAD-4.0.0 | 6.57549E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.47042E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.6148 | likely_pathogenic | 0.608 | pathogenic | -1.393 | Destabilizing | 0.968 | D | 0.564 | neutral | None | None | None | None | N |
L/C | 0.7168 | likely_pathogenic | 0.7112 | pathogenic | -0.869 | Destabilizing | 1.0 | D | 0.689 | prob.neutral | None | None | None | None | N |
L/D | 0.9334 | likely_pathogenic | 0.9309 | pathogenic | -0.591 | Destabilizing | 0.991 | D | 0.751 | deleterious | None | None | None | None | N |
L/E | 0.6686 | likely_pathogenic | 0.6621 | pathogenic | -0.595 | Destabilizing | 0.982 | D | 0.69 | prob.neutral | None | None | None | None | N |
L/F | 0.3416 | ambiguous | 0.333 | benign | -0.941 | Destabilizing | 0.998 | D | 0.708 | prob.delet. | N | 0.521983254 | None | None | N |
L/G | 0.8207 | likely_pathogenic | 0.8215 | pathogenic | -1.696 | Destabilizing | 0.991 | D | 0.749 | deleterious | None | None | None | None | N |
L/H | 0.4557 | ambiguous | 0.4185 | ambiguous | -0.76 | Destabilizing | 0.998 | D | 0.717 | prob.delet. | N | 0.481016797 | None | None | N |
L/I | 0.1522 | likely_benign | 0.1422 | benign | -0.651 | Destabilizing | 0.979 | D | 0.478 | neutral | N | 0.420184251 | None | None | N |
L/K | 0.3983 | ambiguous | 0.3721 | ambiguous | -0.857 | Destabilizing | 0.982 | D | 0.661 | neutral | None | None | None | None | N |
L/M | 0.199 | likely_benign | 0.2022 | benign | -0.555 | Destabilizing | 0.995 | D | 0.689 | prob.neutral | None | None | None | None | N |
L/N | 0.7307 | likely_pathogenic | 0.7158 | pathogenic | -0.695 | Destabilizing | 0.991 | D | 0.755 | deleterious | None | None | None | None | N |
L/P | 0.8083 | likely_pathogenic | 0.8441 | pathogenic | -0.866 | Destabilizing | 0.994 | D | 0.761 | deleterious | N | 0.484637648 | None | None | N |
L/Q | 0.2516 | likely_benign | 0.2294 | benign | -0.854 | Destabilizing | 0.682 | D | 0.429 | neutral | None | None | None | None | N |
L/R | 0.2921 | likely_benign | 0.2537 | benign | -0.261 | Destabilizing | 0.976 | D | 0.739 | prob.delet. | N | 0.509339244 | None | None | N |
L/S | 0.6779 | likely_pathogenic | 0.6666 | pathogenic | -1.328 | Destabilizing | 0.991 | D | 0.672 | neutral | None | None | None | None | N |
L/T | 0.5622 | ambiguous | 0.5556 | ambiguous | -1.208 | Destabilizing | 0.991 | D | 0.691 | prob.neutral | None | None | None | None | N |
L/V | 0.198 | likely_benign | 0.1848 | benign | -0.866 | Destabilizing | 0.958 | D | 0.458 | neutral | N | 0.473093229 | None | None | N |
L/W | 0.4493 | ambiguous | 0.4071 | ambiguous | -0.972 | Destabilizing | 1.0 | D | 0.723 | prob.delet. | None | None | None | None | N |
L/Y | 0.6188 | likely_pathogenic | 0.6005 | pathogenic | -0.753 | Destabilizing | 0.998 | D | 0.751 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.