Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28518 | 85777;85778;85779 | chr2:178560580;178560579;178560578 | chr2:179425307;179425306;179425305 |
N2AB | 26877 | 80854;80855;80856 | chr2:178560580;178560579;178560578 | chr2:179425307;179425306;179425305 |
N2A | 25950 | 78073;78074;78075 | chr2:178560580;178560579;178560578 | chr2:179425307;179425306;179425305 |
N2B | 19453 | 58582;58583;58584 | chr2:178560580;178560579;178560578 | chr2:179425307;179425306;179425305 |
Novex-1 | 19578 | 58957;58958;58959 | chr2:178560580;178560579;178560578 | chr2:179425307;179425306;179425305 |
Novex-2 | 19645 | 59158;59159;59160 | chr2:178560580;178560579;178560578 | chr2:179425307;179425306;179425305 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/D | rs1464682626 | -1.399 | 1.0 | N | 0.804 | 0.446 | 0.327686398923 | gnomAD-2.1.1 | 3.19E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 2.87853E-04 | 0 | 0 |
G/D | rs1464682626 | -1.399 | 1.0 | N | 0.804 | 0.446 | 0.327686398923 | gnomAD-4.0.0 | 2.73779E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 5.63804E-05 | 0 | 8.99549E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.5382 | ambiguous | 0.5828 | pathogenic | -0.48 | Destabilizing | 1.0 | D | 0.716 | prob.delet. | N | 0.508473711 | None | None | N |
G/C | 0.5276 | ambiguous | 0.6001 | pathogenic | -0.807 | Destabilizing | 1.0 | D | 0.801 | deleterious | D | 0.553787255 | None | None | N |
G/D | 0.2496 | likely_benign | 0.2994 | benign | -0.88 | Destabilizing | 1.0 | D | 0.804 | deleterious | N | 0.480961707 | None | None | N |
G/E | 0.4523 | ambiguous | 0.4993 | ambiguous | -1.016 | Destabilizing | 1.0 | D | 0.84 | deleterious | None | None | None | None | N |
G/F | 0.9012 | likely_pathogenic | 0.9203 | pathogenic | -1.038 | Destabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | N |
G/H | 0.7312 | likely_pathogenic | 0.7625 | pathogenic | -0.861 | Destabilizing | 1.0 | D | 0.81 | deleterious | None | None | None | None | N |
G/I | 0.8906 | likely_pathogenic | 0.9156 | pathogenic | -0.424 | Destabilizing | 1.0 | D | 0.803 | deleterious | None | None | None | None | N |
G/K | 0.805 | likely_pathogenic | 0.8294 | pathogenic | -1.13 | Destabilizing | 1.0 | D | 0.84 | deleterious | None | None | None | None | N |
G/L | 0.8806 | likely_pathogenic | 0.901 | pathogenic | -0.424 | Destabilizing | 1.0 | D | 0.815 | deleterious | None | None | None | None | N |
G/M | 0.8696 | likely_pathogenic | 0.8897 | pathogenic | -0.368 | Destabilizing | 1.0 | D | 0.802 | deleterious | None | None | None | None | N |
G/N | 0.3231 | likely_benign | 0.3299 | benign | -0.684 | Destabilizing | 1.0 | D | 0.79 | deleterious | None | None | None | None | N |
G/P | 0.9862 | likely_pathogenic | 0.991 | pathogenic | -0.405 | Destabilizing | 1.0 | D | 0.831 | deleterious | None | None | None | None | N |
G/Q | 0.6742 | likely_pathogenic | 0.7 | pathogenic | -0.966 | Destabilizing | 1.0 | D | 0.831 | deleterious | None | None | None | None | N |
G/R | 0.7152 | likely_pathogenic | 0.7499 | pathogenic | -0.65 | Destabilizing | 1.0 | D | 0.834 | deleterious | D | 0.526021761 | None | None | N |
G/S | 0.2467 | likely_benign | 0.2646 | benign | -0.849 | Destabilizing | 1.0 | D | 0.79 | deleterious | N | 0.518816058 | None | None | N |
G/T | 0.5846 | likely_pathogenic | 0.6339 | pathogenic | -0.919 | Destabilizing | 1.0 | D | 0.836 | deleterious | None | None | None | None | N |
G/V | 0.7916 | likely_pathogenic | 0.834 | pathogenic | -0.405 | Destabilizing | 1.0 | D | 0.819 | deleterious | D | 0.54192397 | None | None | N |
G/W | 0.7173 | likely_pathogenic | 0.7689 | pathogenic | -1.261 | Destabilizing | 1.0 | D | 0.813 | deleterious | None | None | None | None | N |
G/Y | 0.7228 | likely_pathogenic | 0.7647 | pathogenic | -0.906 | Destabilizing | 1.0 | D | 0.79 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.