Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28525 | 85798;85799;85800 | chr2:178560559;178560558;178560557 | chr2:179425286;179425285;179425284 |
N2AB | 26884 | 80875;80876;80877 | chr2:178560559;178560558;178560557 | chr2:179425286;179425285;179425284 |
N2A | 25957 | 78094;78095;78096 | chr2:178560559;178560558;178560557 | chr2:179425286;179425285;179425284 |
N2B | 19460 | 58603;58604;58605 | chr2:178560559;178560558;178560557 | chr2:179425286;179425285;179425284 |
Novex-1 | 19585 | 58978;58979;58980 | chr2:178560559;178560558;178560557 | chr2:179425286;179425285;179425284 |
Novex-2 | 19652 | 59179;59180;59181 | chr2:178560559;178560558;178560557 | chr2:179425286;179425285;179425284 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | None | None | 0.997 | N | 0.639 | 0.448 | 0.765028627367 | gnomAD-4.0.0 | 1.59253E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85915E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.8325 | likely_pathogenic | 0.8056 | pathogenic | -2.555 | Highly Destabilizing | 0.999 | D | 0.656 | neutral | D | 0.570583696 | None | None | N |
V/C | 0.9685 | likely_pathogenic | 0.9688 | pathogenic | -1.998 | Destabilizing | 1.0 | D | 0.81 | deleterious | None | None | None | None | N |
V/D | 0.9962 | likely_pathogenic | 0.9955 | pathogenic | -3.604 | Highly Destabilizing | 1.0 | D | 0.888 | deleterious | None | None | None | None | N |
V/E | 0.9889 | likely_pathogenic | 0.9871 | pathogenic | -3.29 | Highly Destabilizing | 1.0 | D | 0.879 | deleterious | D | 0.64968199 | None | None | N |
V/F | 0.9138 | likely_pathogenic | 0.9026 | pathogenic | -1.476 | Destabilizing | 1.0 | D | 0.833 | deleterious | None | None | None | None | N |
V/G | 0.8894 | likely_pathogenic | 0.8649 | pathogenic | -3.142 | Highly Destabilizing | 1.0 | D | 0.886 | deleterious | D | 0.64968199 | None | None | N |
V/H | 0.9976 | likely_pathogenic | 0.9971 | pathogenic | -2.989 | Highly Destabilizing | 1.0 | D | 0.877 | deleterious | None | None | None | None | N |
V/I | 0.1105 | likely_benign | 0.116 | benign | -0.833 | Destabilizing | 0.997 | D | 0.639 | neutral | N | 0.489498807 | None | None | N |
V/K | 0.9902 | likely_pathogenic | 0.9879 | pathogenic | -2.203 | Highly Destabilizing | 1.0 | D | 0.878 | deleterious | None | None | None | None | N |
V/L | 0.747 | likely_pathogenic | 0.7318 | pathogenic | -0.833 | Destabilizing | 0.997 | D | 0.672 | neutral | D | 0.548423609 | None | None | N |
V/M | 0.7993 | likely_pathogenic | 0.7797 | pathogenic | -1.078 | Destabilizing | 1.0 | D | 0.793 | deleterious | None | None | None | None | N |
V/N | 0.9885 | likely_pathogenic | 0.9867 | pathogenic | -2.886 | Highly Destabilizing | 1.0 | D | 0.895 | deleterious | None | None | None | None | N |
V/P | 0.9935 | likely_pathogenic | 0.9935 | pathogenic | -1.391 | Destabilizing | 1.0 | D | 0.879 | deleterious | None | None | None | None | N |
V/Q | 0.9887 | likely_pathogenic | 0.9863 | pathogenic | -2.547 | Highly Destabilizing | 1.0 | D | 0.89 | deleterious | None | None | None | None | N |
V/R | 0.9827 | likely_pathogenic | 0.978 | pathogenic | -2.211 | Highly Destabilizing | 1.0 | D | 0.899 | deleterious | None | None | None | None | N |
V/S | 0.9615 | likely_pathogenic | 0.9527 | pathogenic | -3.369 | Highly Destabilizing | 1.0 | D | 0.876 | deleterious | None | None | None | None | N |
V/T | 0.9168 | likely_pathogenic | 0.8991 | pathogenic | -2.906 | Highly Destabilizing | 0.999 | D | 0.687 | prob.neutral | None | None | None | None | N |
V/W | 0.9987 | likely_pathogenic | 0.9984 | pathogenic | -2.058 | Highly Destabilizing | 1.0 | D | 0.869 | deleterious | None | None | None | None | N |
V/Y | 0.9908 | likely_pathogenic | 0.9895 | pathogenic | -1.772 | Destabilizing | 1.0 | D | 0.829 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.