Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28531 | 85816;85817;85818 | chr2:178560541;178560540;178560539 | chr2:179425268;179425267;179425266 |
N2AB | 26890 | 80893;80894;80895 | chr2:178560541;178560540;178560539 | chr2:179425268;179425267;179425266 |
N2A | 25963 | 78112;78113;78114 | chr2:178560541;178560540;178560539 | chr2:179425268;179425267;179425266 |
N2B | 19466 | 58621;58622;58623 | chr2:178560541;178560540;178560539 | chr2:179425268;179425267;179425266 |
Novex-1 | 19591 | 58996;58997;58998 | chr2:178560541;178560540;178560539 | chr2:179425268;179425267;179425266 |
Novex-2 | 19658 | 59197;59198;59199 | chr2:178560541;178560540;178560539 | chr2:179425268;179425267;179425266 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/C | None | None | 0.999 | N | 0.701 | 0.434 | 0.494568219684 | gnomAD-4.0.0 | 6.84418E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99564E-07 | 0 | 0 |
Y/F | rs1238497869 | -0.16 | 0.892 | N | 0.559 | 0.292 | 0.41518383557 | gnomAD-2.1.1 | 8.08E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.79E-05 | 0 |
Y/F | rs1238497869 | -0.16 | 0.892 | N | 0.559 | 0.292 | 0.41518383557 | gnomAD-4.0.0 | 4.17495E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.39738E-05 | 0 | 1.65733E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.883 | likely_pathogenic | 0.9117 | pathogenic | -0.667 | Destabilizing | 0.916 | D | 0.645 | neutral | None | None | None | None | I |
Y/C | 0.4715 | ambiguous | 0.5195 | ambiguous | 0.13 | Stabilizing | 0.999 | D | 0.701 | prob.neutral | N | 0.469874301 | None | None | I |
Y/D | 0.843 | likely_pathogenic | 0.874 | pathogenic | 0.908 | Stabilizing | 0.994 | D | 0.685 | prob.neutral | N | 0.501572906 | None | None | I |
Y/E | 0.9469 | likely_pathogenic | 0.9597 | pathogenic | 0.888 | Stabilizing | 0.987 | D | 0.67 | neutral | None | None | None | None | I |
Y/F | 0.1056 | likely_benign | 0.1232 | benign | -0.359 | Destabilizing | 0.892 | D | 0.559 | neutral | N | 0.480731277 | None | None | I |
Y/G | 0.8802 | likely_pathogenic | 0.9088 | pathogenic | -0.856 | Destabilizing | 0.987 | D | 0.661 | neutral | None | None | None | None | I |
Y/H | 0.4746 | ambiguous | 0.5065 | ambiguous | 0.199 | Stabilizing | 0.994 | D | 0.613 | neutral | N | 0.488850702 | None | None | I |
Y/I | 0.6909 | likely_pathogenic | 0.7403 | pathogenic | -0.193 | Destabilizing | 0.95 | D | 0.629 | neutral | None | None | None | None | I |
Y/K | 0.937 | likely_pathogenic | 0.9442 | pathogenic | 0.237 | Stabilizing | 0.975 | D | 0.659 | neutral | None | None | None | None | I |
Y/L | 0.7505 | likely_pathogenic | 0.793 | pathogenic | -0.193 | Destabilizing | 0.437 | N | 0.6 | neutral | None | None | None | None | I |
Y/M | 0.7754 | likely_pathogenic | 0.8299 | pathogenic | -0.046 | Destabilizing | 0.693 | D | 0.557 | neutral | None | None | None | None | I |
Y/N | 0.5506 | ambiguous | 0.5928 | pathogenic | 0.072 | Stabilizing | 0.983 | D | 0.677 | prob.neutral | N | 0.471542914 | None | None | I |
Y/P | 0.988 | likely_pathogenic | 0.9898 | pathogenic | -0.331 | Destabilizing | 0.996 | D | 0.7 | prob.neutral | None | None | None | None | I |
Y/Q | 0.8934 | likely_pathogenic | 0.9134 | pathogenic | 0.106 | Stabilizing | 0.987 | D | 0.638 | neutral | None | None | None | None | I |
Y/R | 0.8783 | likely_pathogenic | 0.8763 | pathogenic | 0.494 | Stabilizing | 0.987 | D | 0.679 | prob.neutral | None | None | None | None | I |
Y/S | 0.75 | likely_pathogenic | 0.7925 | pathogenic | -0.372 | Destabilizing | 0.967 | D | 0.615 | neutral | N | 0.519998954 | None | None | I |
Y/T | 0.883 | likely_pathogenic | 0.902 | pathogenic | -0.298 | Destabilizing | 0.975 | D | 0.646 | neutral | None | None | None | None | I |
Y/V | 0.6697 | likely_pathogenic | 0.7134 | pathogenic | -0.331 | Destabilizing | 0.845 | D | 0.644 | neutral | None | None | None | None | I |
Y/W | 0.5177 | ambiguous | 0.5621 | ambiguous | -0.483 | Destabilizing | 0.999 | D | 0.6 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.