Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28533 | 85822;85823;85824 | chr2:178560535;178560534;178560533 | chr2:179425262;179425261;179425260 |
N2AB | 26892 | 80899;80900;80901 | chr2:178560535;178560534;178560533 | chr2:179425262;179425261;179425260 |
N2A | 25965 | 78118;78119;78120 | chr2:178560535;178560534;178560533 | chr2:179425262;179425261;179425260 |
N2B | 19468 | 58627;58628;58629 | chr2:178560535;178560534;178560533 | chr2:179425262;179425261;179425260 |
Novex-1 | 19593 | 59002;59003;59004 | chr2:178560535;178560534;178560533 | chr2:179425262;179425261;179425260 |
Novex-2 | 19660 | 59203;59204;59205 | chr2:178560535;178560534;178560533 | chr2:179425262;179425261;179425260 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | None | None | 0.826 | N | 0.443 | 0.159 | 0.408307896497 | gnomAD-4.0.0 | 1.59252E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85953E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.0898 | likely_benign | 0.0892 | benign | -0.859 | Destabilizing | 0.826 | D | 0.471 | neutral | N | 0.470415496 | None | None | N |
V/C | 0.5382 | ambiguous | 0.5697 | pathogenic | -0.888 | Destabilizing | 0.999 | D | 0.577 | neutral | None | None | None | None | N |
V/D | 0.2154 | likely_benign | 0.2063 | benign | -0.121 | Destabilizing | 0.015 | N | 0.463 | neutral | N | 0.468122646 | None | None | N |
V/E | 0.1711 | likely_benign | 0.1678 | benign | -0.192 | Destabilizing | 0.884 | D | 0.57 | neutral | None | None | None | None | N |
V/F | 0.1365 | likely_benign | 0.1262 | benign | -0.82 | Destabilizing | 0.996 | D | 0.602 | neutral | N | 0.465160132 | None | None | N |
V/G | 0.1637 | likely_benign | 0.1594 | benign | -1.059 | Destabilizing | 0.959 | D | 0.591 | neutral | N | 0.475061633 | None | None | N |
V/H | 0.3639 | ambiguous | 0.3703 | ambiguous | -0.454 | Destabilizing | 0.999 | D | 0.649 | neutral | None | None | None | None | N |
V/I | 0.0717 | likely_benign | 0.0736 | benign | -0.461 | Destabilizing | 0.826 | D | 0.443 | neutral | N | 0.434052051 | None | None | N |
V/K | 0.1672 | likely_benign | 0.1644 | benign | -0.547 | Destabilizing | 0.939 | D | 0.641 | neutral | None | None | None | None | N |
V/L | 0.1463 | likely_benign | 0.1527 | benign | -0.461 | Destabilizing | 0.826 | D | 0.455 | neutral | N | 0.478880264 | None | None | N |
V/M | 0.1123 | likely_benign | 0.1159 | benign | -0.501 | Destabilizing | 0.997 | D | 0.604 | neutral | None | None | None | None | N |
V/N | 0.1946 | likely_benign | 0.1905 | benign | -0.337 | Destabilizing | 0.939 | D | 0.639 | neutral | None | None | None | None | N |
V/P | 0.2184 | likely_benign | 0.251 | benign | -0.557 | Destabilizing | 0.997 | D | 0.646 | neutral | None | None | None | None | N |
V/Q | 0.1963 | likely_benign | 0.1951 | benign | -0.552 | Destabilizing | 0.991 | D | 0.661 | neutral | None | None | None | None | N |
V/R | 0.1431 | likely_benign | 0.1395 | benign | -0.044 | Destabilizing | 0.991 | D | 0.662 | neutral | None | None | None | None | N |
V/S | 0.133 | likely_benign | 0.1336 | benign | -0.871 | Destabilizing | 0.884 | D | 0.58 | neutral | None | None | None | None | N |
V/T | 0.106 | likely_benign | 0.1081 | benign | -0.827 | Destabilizing | 0.17 | N | 0.226 | neutral | None | None | None | None | N |
V/W | 0.6241 | likely_pathogenic | 0.6213 | pathogenic | -0.849 | Destabilizing | 0.999 | D | 0.693 | prob.neutral | None | None | None | None | N |
V/Y | 0.3634 | ambiguous | 0.3695 | ambiguous | -0.564 | Destabilizing | 0.997 | D | 0.591 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.