Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28537 | 85834;85835;85836 | chr2:178560523;178560522;178560521 | chr2:179425250;179425249;179425248 |
N2AB | 26896 | 80911;80912;80913 | chr2:178560523;178560522;178560521 | chr2:179425250;179425249;179425248 |
N2A | 25969 | 78130;78131;78132 | chr2:178560523;178560522;178560521 | chr2:179425250;179425249;179425248 |
N2B | 19472 | 58639;58640;58641 | chr2:178560523;178560522;178560521 | chr2:179425250;179425249;179425248 |
Novex-1 | 19597 | 59014;59015;59016 | chr2:178560523;178560522;178560521 | chr2:179425250;179425249;179425248 |
Novex-2 | 19664 | 59215;59216;59217 | chr2:178560523;178560522;178560521 | chr2:179425250;179425249;179425248 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/P | None | None | 1.0 | N | 0.787 | 0.534 | 0.774090168342 | gnomAD-4.0.0 | 1.59253E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.78102E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.3991 | ambiguous | 0.3741 | ambiguous | -2.284 | Highly Destabilizing | 0.999 | D | 0.659 | neutral | None | None | None | None | N |
L/C | 0.6004 | likely_pathogenic | 0.5913 | pathogenic | -1.495 | Destabilizing | 1.0 | D | 0.724 | prob.delet. | None | None | None | None | N |
L/D | 0.9686 | likely_pathogenic | 0.9582 | pathogenic | -2.142 | Highly Destabilizing | 1.0 | D | 0.783 | deleterious | None | None | None | None | N |
L/E | 0.739 | likely_pathogenic | 0.6907 | pathogenic | -2.004 | Highly Destabilizing | 1.0 | D | 0.769 | deleterious | None | None | None | None | N |
L/F | 0.5442 | ambiguous | 0.4864 | ambiguous | -1.35 | Destabilizing | 1.0 | D | 0.658 | neutral | None | None | None | None | N |
L/G | 0.8151 | likely_pathogenic | 0.7864 | pathogenic | -2.75 | Highly Destabilizing | 1.0 | D | 0.75 | deleterious | None | None | None | None | N |
L/H | 0.7283 | likely_pathogenic | 0.685 | pathogenic | -2.074 | Highly Destabilizing | 1.0 | D | 0.789 | deleterious | None | None | None | None | N |
L/I | 0.1628 | likely_benign | 0.1506 | benign | -0.983 | Destabilizing | 0.999 | D | 0.597 | neutral | N | 0.476249721 | None | None | N |
L/K | 0.6018 | likely_pathogenic | 0.577 | pathogenic | -1.657 | Destabilizing | 1.0 | D | 0.665 | neutral | None | None | None | None | N |
L/M | 0.191 | likely_benign | 0.1795 | benign | -0.888 | Destabilizing | 1.0 | D | 0.693 | prob.neutral | None | None | None | None | N |
L/N | 0.8545 | likely_pathogenic | 0.8272 | pathogenic | -1.707 | Destabilizing | 1.0 | D | 0.787 | deleterious | None | None | None | None | N |
L/P | 0.9704 | likely_pathogenic | 0.9627 | pathogenic | -1.392 | Destabilizing | 1.0 | D | 0.787 | deleterious | N | 0.517320076 | None | None | N |
L/Q | 0.3629 | ambiguous | 0.3286 | benign | -1.715 | Destabilizing | 1.0 | D | 0.739 | prob.delet. | N | 0.517320076 | None | None | N |
L/R | 0.4639 | ambiguous | 0.4263 | ambiguous | -1.237 | Destabilizing | 1.0 | D | 0.729 | prob.delet. | N | 0.517066587 | None | None | N |
L/S | 0.596 | likely_pathogenic | 0.5535 | ambiguous | -2.408 | Highly Destabilizing | 1.0 | D | 0.641 | neutral | None | None | None | None | N |
L/T | 0.3693 | ambiguous | 0.366 | ambiguous | -2.142 | Highly Destabilizing | 1.0 | D | 0.658 | neutral | None | None | None | None | N |
L/V | 0.1364 | likely_benign | 0.1319 | benign | -1.392 | Destabilizing | 0.999 | D | 0.626 | neutral | N | 0.50050633 | None | None | N |
L/W | 0.7781 | likely_pathogenic | 0.7027 | pathogenic | -1.613 | Destabilizing | 1.0 | D | 0.736 | prob.delet. | None | None | None | None | N |
L/Y | 0.8215 | likely_pathogenic | 0.7893 | pathogenic | -1.358 | Destabilizing | 1.0 | D | 0.719 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.