Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28538 | 85837;85838;85839 | chr2:178560520;178560519;178560518 | chr2:179425247;179425246;179425245 |
N2AB | 26897 | 80914;80915;80916 | chr2:178560520;178560519;178560518 | chr2:179425247;179425246;179425245 |
N2A | 25970 | 78133;78134;78135 | chr2:178560520;178560519;178560518 | chr2:179425247;179425246;179425245 |
N2B | 19473 | 58642;58643;58644 | chr2:178560520;178560519;178560518 | chr2:179425247;179425246;179425245 |
Novex-1 | 19598 | 59017;59018;59019 | chr2:178560520;178560519;178560518 | chr2:179425247;179425246;179425245 |
Novex-2 | 19665 | 59218;59219;59220 | chr2:178560520;178560519;178560518 | chr2:179425247;179425246;179425245 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | None | None | 0.856 | N | 0.768 | 0.271 | 0.345175991111 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.3148 | likely_benign | 0.2984 | benign | -0.639 | Destabilizing | 0.856 | D | 0.784 | deleterious | N | 0.490990296 | None | None | N |
E/C | 0.8917 | likely_pathogenic | 0.8979 | pathogenic | -0.327 | Destabilizing | 0.998 | D | 0.839 | deleterious | None | None | None | None | N |
E/D | 0.3053 | likely_benign | 0.3001 | benign | -0.828 | Destabilizing | 0.018 | N | 0.297 | neutral | N | 0.474567881 | None | None | N |
E/F | 0.8069 | likely_pathogenic | 0.8189 | pathogenic | 0.271 | Stabilizing | 0.998 | D | 0.859 | deleterious | None | None | None | None | N |
E/G | 0.4824 | ambiguous | 0.4475 | ambiguous | -1.029 | Destabilizing | 0.954 | D | 0.791 | deleterious | N | 0.500460497 | None | None | N |
E/H | 0.6675 | likely_pathogenic | 0.6683 | pathogenic | 0.237 | Stabilizing | 0.998 | D | 0.794 | deleterious | None | None | None | None | N |
E/I | 0.4172 | ambiguous | 0.4103 | ambiguous | 0.436 | Stabilizing | 0.982 | D | 0.835 | deleterious | None | None | None | None | N |
E/K | 0.3365 | likely_benign | 0.3134 | benign | -0.142 | Destabilizing | 0.856 | D | 0.768 | deleterious | N | 0.475772876 | None | None | N |
E/L | 0.4214 | ambiguous | 0.4287 | ambiguous | 0.436 | Stabilizing | 0.982 | D | 0.781 | deleterious | None | None | None | None | N |
E/M | 0.5352 | ambiguous | 0.5371 | ambiguous | 0.72 | Stabilizing | 0.998 | D | 0.866 | deleterious | None | None | None | None | N |
E/N | 0.5157 | ambiguous | 0.5229 | ambiguous | -0.907 | Destabilizing | 0.932 | D | 0.818 | deleterious | None | None | None | None | N |
E/P | 0.7435 | likely_pathogenic | 0.7595 | pathogenic | 0.099 | Stabilizing | 0.982 | D | 0.794 | deleterious | None | None | None | None | N |
E/Q | 0.1959 | likely_benign | 0.2031 | benign | -0.727 | Destabilizing | 0.977 | D | 0.805 | deleterious | N | 0.467125596 | None | None | N |
E/R | 0.5007 | ambiguous | 0.4746 | ambiguous | 0.227 | Stabilizing | 0.982 | D | 0.802 | deleterious | None | None | None | None | N |
E/S | 0.4314 | ambiguous | 0.4223 | ambiguous | -1.195 | Destabilizing | 0.887 | D | 0.765 | deleterious | None | None | None | None | N |
E/T | 0.3581 | ambiguous | 0.3463 | ambiguous | -0.846 | Destabilizing | 0.965 | D | 0.765 | deleterious | None | None | None | None | N |
E/V | 0.2363 | likely_benign | 0.2243 | benign | 0.099 | Stabilizing | 0.977 | D | 0.793 | deleterious | N | 0.486016773 | None | None | N |
E/W | 0.9415 | likely_pathogenic | 0.9428 | pathogenic | 0.642 | Stabilizing | 0.998 | D | 0.845 | deleterious | None | None | None | None | N |
E/Y | 0.7389 | likely_pathogenic | 0.7497 | pathogenic | 0.591 | Stabilizing | 0.998 | D | 0.862 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.