Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28545 | 85858;85859;85860 | chr2:178560499;178560498;178560497 | chr2:179425226;179425225;179425224 |
N2AB | 26904 | 80935;80936;80937 | chr2:178560499;178560498;178560497 | chr2:179425226;179425225;179425224 |
N2A | 25977 | 78154;78155;78156 | chr2:178560499;178560498;178560497 | chr2:179425226;179425225;179425224 |
N2B | 19480 | 58663;58664;58665 | chr2:178560499;178560498;178560497 | chr2:179425226;179425225;179425224 |
Novex-1 | 19605 | 59038;59039;59040 | chr2:178560499;178560498;178560497 | chr2:179425226;179425225;179425224 |
Novex-2 | 19672 | 59239;59240;59241 | chr2:178560499;178560498;178560497 | chr2:179425226;179425225;179425224 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/V | None | None | 0.003 | N | 0.241 | 0.079 | 0.27855597813 | gnomAD-4.0.0 | 6.84519E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99713E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.1084 | likely_benign | 0.1095 | benign | -1.166 | Destabilizing | 0.057 | N | 0.279 | neutral | None | None | None | None | N |
L/C | 0.2756 | likely_benign | 0.2874 | benign | -0.676 | Destabilizing | 0.96 | D | 0.281 | neutral | None | None | None | None | N |
L/D | 0.4643 | ambiguous | 0.4612 | ambiguous | -0.269 | Destabilizing | 0.507 | D | 0.63 | neutral | None | None | None | None | N |
L/E | 0.1599 | likely_benign | 0.1573 | benign | -0.326 | Destabilizing | 0.128 | N | 0.537 | neutral | None | None | None | None | N |
L/F | 0.1218 | likely_benign | 0.1207 | benign | -0.967 | Destabilizing | 0.507 | D | 0.352 | neutral | None | None | None | None | N |
L/G | 0.3679 | ambiguous | 0.3711 | ambiguous | -1.407 | Destabilizing | 0.507 | D | 0.578 | neutral | None | None | None | None | N |
L/H | 0.1463 | likely_benign | 0.1396 | benign | -0.628 | Destabilizing | 0.795 | D | 0.478 | neutral | None | None | None | None | N |
L/I | 0.0712 | likely_benign | 0.069 | benign | -0.62 | Destabilizing | 0.003 | N | 0.212 | neutral | N | 0.451456881 | None | None | N |
L/K | 0.1256 | likely_benign | 0.1284 | benign | -0.546 | Destabilizing | 0.128 | N | 0.475 | neutral | None | None | None | None | N |
L/M | 0.0823 | likely_benign | 0.0817 | benign | -0.432 | Destabilizing | 0.011 | N | 0.231 | neutral | None | None | None | None | N |
L/N | 0.2472 | likely_benign | 0.2499 | benign | -0.262 | Destabilizing | 0.507 | D | 0.663 | prob.neutral | None | None | None | None | N |
L/P | 0.6816 | likely_pathogenic | 0.6742 | pathogenic | -0.768 | Destabilizing | 0.612 | D | 0.663 | prob.neutral | N | 0.432180474 | None | None | N |
L/Q | 0.0802 | likely_benign | 0.0744 | benign | -0.499 | Destabilizing | 0.007 | N | 0.358 | neutral | N | 0.38946706 | None | None | N |
L/R | 0.1064 | likely_benign | 0.1004 | benign | 0.024 | Stabilizing | 0.28 | N | 0.59 | neutral | N | 0.365032762 | None | None | N |
L/S | 0.126 | likely_benign | 0.1285 | benign | -0.872 | Destabilizing | 0.128 | N | 0.437 | neutral | None | None | None | None | N |
L/T | 0.0915 | likely_benign | 0.0957 | benign | -0.817 | Destabilizing | 0.227 | N | 0.397 | neutral | None | None | None | None | N |
L/V | 0.0615 | likely_benign | 0.0617 | benign | -0.768 | Destabilizing | 0.003 | N | 0.241 | neutral | N | 0.400644059 | None | None | N |
L/W | 0.2311 | likely_benign | 0.2135 | benign | -0.955 | Destabilizing | 0.96 | D | 0.558 | neutral | None | None | None | None | N |
L/Y | 0.2755 | likely_benign | 0.2717 | benign | -0.72 | Destabilizing | 0.676 | D | 0.431 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.