Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC2855085873;85874;85875 chr2:178560484;178560483;178560482chr2:179425211;179425210;179425209
N2AB2690980950;80951;80952 chr2:178560484;178560483;178560482chr2:179425211;179425210;179425209
N2A2598278169;78170;78171 chr2:178560484;178560483;178560482chr2:179425211;179425210;179425209
N2B1948558678;58679;58680 chr2:178560484;178560483;178560482chr2:179425211;179425210;179425209
Novex-11961059053;59054;59055 chr2:178560484;178560483;178560482chr2:179425211;179425210;179425209
Novex-21967759254;59255;59256 chr2:178560484;178560483;178560482chr2:179425211;179425210;179425209
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: V
  • RefSeq wild type transcript codon: GTT
  • RefSeq wild type template codon: CAA
  • Domain: Fn3-96
  • Domain position: 1
  • Structural Position: 1
  • Q(SASA): 0.4374
  • Predicted PPI site: I

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
V/D rs727505194 -0.017 0.449 N 0.817 0.33 None gnomAD-2.1.1 1.21E-05 None None None None I None 1.93999E-04 0 None 0 0 None 0 None 0 0 0
V/D rs727505194 -0.017 0.449 N 0.817 0.33 None gnomAD-3.1.2 1.32E-05 None None None None I None 4.83E-05 0 0 0 0 None 0 0 0 0 0
V/D rs727505194 -0.017 0.449 N 0.817 0.33 None gnomAD-4.0.0 4.95944E-06 None None None None I None 1.0686E-04 0 None 0 0 None 0 0 0 0 0

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
V/A 0.1666 likely_benign 0.1565 benign -0.387 Destabilizing 0.046 N 0.431 neutral N 0.485923666 None None I
V/C 0.6447 likely_pathogenic 0.6407 pathogenic -0.614 Destabilizing 0.892 D 0.549 neutral None None None None I
V/D 0.4719 ambiguous 0.4308 ambiguous 0.018 Stabilizing 0.449 N 0.817 deleterious N 0.509121004 None None I
V/E 0.296 likely_benign 0.2764 benign -0.098 Destabilizing 0.519 D 0.784 deleterious None None None None I
V/F 0.2085 likely_benign 0.2005 benign -0.804 Destabilizing 0.449 N 0.537 neutral N 0.476431213 None None I
V/G 0.2923 likely_benign 0.2694 benign -0.477 Destabilizing 0.449 N 0.709 prob.delet. N 0.497511209 None None I
V/H 0.551 ambiguous 0.5073 ambiguous -0.174 Destabilizing 0.962 D 0.797 deleterious None None None None I
V/I 0.0762 likely_benign 0.0761 benign -0.305 Destabilizing 0.001 N 0.15 neutral N 0.492350993 None None I
V/K 0.2599 likely_benign 0.2446 benign -0.061 Destabilizing 0.519 D 0.783 deleterious None None None None I
V/L 0.1581 likely_benign 0.1526 benign -0.305 Destabilizing 0.016 N 0.427 neutral N 0.481901926 None None I
V/M 0.1401 likely_benign 0.1349 benign -0.222 Destabilizing 0.519 D 0.504 neutral None None None None I
V/N 0.3223 likely_benign 0.28 benign 0.106 Stabilizing 0.519 D 0.811 deleterious None None None None I
V/P 0.249 likely_benign 0.2444 benign -0.3 Destabilizing 0.687 D 0.819 deleterious None None None None I
V/Q 0.2841 likely_benign 0.2571 benign -0.157 Destabilizing 0.687 D 0.8 deleterious None None None None I
V/R 0.2403 likely_benign 0.2155 benign 0.336 Stabilizing 0.519 D 0.824 deleterious None None None None I
V/S 0.2299 likely_benign 0.2102 benign -0.28 Destabilizing 0.351 N 0.527 neutral None None None None I
V/T 0.1675 likely_benign 0.1595 benign -0.299 Destabilizing 0.001 N 0.292 neutral None None None None I
V/W 0.8112 likely_pathogenic 0.7987 pathogenic -0.852 Destabilizing 0.962 D 0.76 deleterious None None None None I
V/Y 0.5228 ambiguous 0.5013 ambiguous -0.498 Destabilizing 0.687 D 0.485 neutral None None None None I

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.