Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC2855385882;85883;85884 chr2:178560475;178560474;178560473chr2:179425202;179425201;179425200
N2AB2691280959;80960;80961 chr2:178560475;178560474;178560473chr2:179425202;179425201;179425200
N2A2598578178;78179;78180 chr2:178560475;178560474;178560473chr2:179425202;179425201;179425200
N2B1948858687;58688;58689 chr2:178560475;178560474;178560473chr2:179425202;179425201;179425200
Novex-11961359062;59063;59064 chr2:178560475;178560474;178560473chr2:179425202;179425201;179425200
Novex-21968059263;59264;59265 chr2:178560475;178560474;178560473chr2:179425202;179425201;179425200
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: P
  • RefSeq wild type transcript codon: CCA
  • RefSeq wild type template codon: GGT
  • Domain: Fn3-96
  • Domain position: 4
  • Structural Position: 4
  • Q(SASA): 0.2487
  • Predicted PPI site: I

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
P/L rs1303551225 -0.752 0.822 D 0.815 0.401 0.413241256734 gnomAD-3.1.2 1.32E-05 None None None None I None 0 0 0 0 1.9305E-04 None 0 0 0 2.07297E-04 0
P/L rs1303551225 -0.752 0.822 D 0.815 0.401 0.413241256734 gnomAD-4.0.0 5.12755E-06 None None None None I None 0 0 None 0 7.29359E-05 None 0 0 0 1.34117E-05 0

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
P/A 0.0592 likely_benign 0.0615 benign -1.513 Destabilizing 0.025 N 0.365 neutral N 0.470434139 None None I
P/C 0.3783 ambiguous 0.3727 ambiguous -1.298 Destabilizing 0.998 D 0.849 deleterious None None None None I
P/D 0.6934 likely_pathogenic 0.6986 pathogenic -1.778 Destabilizing 0.956 D 0.734 prob.delet. None None None None I
P/E 0.3031 likely_benign 0.3013 benign -1.806 Destabilizing 0.754 D 0.705 prob.neutral None None None None I
P/F 0.4933 ambiguous 0.476 ambiguous -1.415 Destabilizing 0.993 D 0.86 deleterious None None None None I
P/G 0.3368 likely_benign 0.3415 ambiguous -1.781 Destabilizing 0.754 D 0.773 deleterious None None None None I
P/H 0.2273 likely_benign 0.2358 benign -1.243 Destabilizing 0.994 D 0.825 deleterious None None None None I
P/I 0.3241 likely_benign 0.2975 benign -0.884 Destabilizing 0.978 D 0.837 deleterious None None None None I
P/K 0.2512 likely_benign 0.2542 benign -1.152 Destabilizing 0.019 N 0.421 neutral None None None None I
P/L 0.1543 likely_benign 0.1472 benign -0.884 Destabilizing 0.822 D 0.815 deleterious D 0.530395718 None None I
P/M 0.3064 likely_benign 0.2929 benign -0.723 Destabilizing 0.998 D 0.825 deleterious None None None None I
P/N 0.476 ambiguous 0.4814 ambiguous -1.023 Destabilizing 0.956 D 0.798 deleterious None None None None I
P/Q 0.1346 likely_benign 0.1416 benign -1.303 Destabilizing 0.942 D 0.736 prob.delet. N 0.485994001 None None I
P/R 0.1582 likely_benign 0.1619 benign -0.583 Destabilizing 0.89 D 0.808 deleterious N 0.506251076 None None I
P/S 0.1153 likely_benign 0.1183 benign -1.499 Destabilizing 0.698 D 0.702 prob.neutral D 0.525466276 None None I
P/T 0.1374 likely_benign 0.1384 benign -1.426 Destabilizing 0.822 D 0.713 prob.delet. N 0.511784484 None None I
P/V 0.2017 likely_benign 0.1889 benign -1.061 Destabilizing 0.86 D 0.787 deleterious None None None None I
P/W 0.7306 likely_pathogenic 0.7099 pathogenic -1.528 Destabilizing 0.998 D 0.858 deleterious None None None None I
P/Y 0.4864 ambiguous 0.48 ambiguous -1.225 Destabilizing 0.993 D 0.856 deleterious None None None None I

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.