Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28553 | 85882;85883;85884 | chr2:178560475;178560474;178560473 | chr2:179425202;179425201;179425200 |
N2AB | 26912 | 80959;80960;80961 | chr2:178560475;178560474;178560473 | chr2:179425202;179425201;179425200 |
N2A | 25985 | 78178;78179;78180 | chr2:178560475;178560474;178560473 | chr2:179425202;179425201;179425200 |
N2B | 19488 | 58687;58688;58689 | chr2:178560475;178560474;178560473 | chr2:179425202;179425201;179425200 |
Novex-1 | 19613 | 59062;59063;59064 | chr2:178560475;178560474;178560473 | chr2:179425202;179425201;179425200 |
Novex-2 | 19680 | 59263;59264;59265 | chr2:178560475;178560474;178560473 | chr2:179425202;179425201;179425200 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/L | rs1303551225 | -0.752 | 0.822 | D | 0.815 | 0.401 | 0.413241256734 | gnomAD-3.1.2 | 1.32E-05 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 1.9305E-04 | None | 0 | 0 | 0 | 2.07297E-04 | 0 |
P/L | rs1303551225 | -0.752 | 0.822 | D | 0.815 | 0.401 | 0.413241256734 | gnomAD-4.0.0 | 5.12755E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 7.29359E-05 | None | 0 | 0 | 0 | 1.34117E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.0592 | likely_benign | 0.0615 | benign | -1.513 | Destabilizing | 0.025 | N | 0.365 | neutral | N | 0.470434139 | None | None | I |
P/C | 0.3783 | ambiguous | 0.3727 | ambiguous | -1.298 | Destabilizing | 0.998 | D | 0.849 | deleterious | None | None | None | None | I |
P/D | 0.6934 | likely_pathogenic | 0.6986 | pathogenic | -1.778 | Destabilizing | 0.956 | D | 0.734 | prob.delet. | None | None | None | None | I |
P/E | 0.3031 | likely_benign | 0.3013 | benign | -1.806 | Destabilizing | 0.754 | D | 0.705 | prob.neutral | None | None | None | None | I |
P/F | 0.4933 | ambiguous | 0.476 | ambiguous | -1.415 | Destabilizing | 0.993 | D | 0.86 | deleterious | None | None | None | None | I |
P/G | 0.3368 | likely_benign | 0.3415 | ambiguous | -1.781 | Destabilizing | 0.754 | D | 0.773 | deleterious | None | None | None | None | I |
P/H | 0.2273 | likely_benign | 0.2358 | benign | -1.243 | Destabilizing | 0.994 | D | 0.825 | deleterious | None | None | None | None | I |
P/I | 0.3241 | likely_benign | 0.2975 | benign | -0.884 | Destabilizing | 0.978 | D | 0.837 | deleterious | None | None | None | None | I |
P/K | 0.2512 | likely_benign | 0.2542 | benign | -1.152 | Destabilizing | 0.019 | N | 0.421 | neutral | None | None | None | None | I |
P/L | 0.1543 | likely_benign | 0.1472 | benign | -0.884 | Destabilizing | 0.822 | D | 0.815 | deleterious | D | 0.530395718 | None | None | I |
P/M | 0.3064 | likely_benign | 0.2929 | benign | -0.723 | Destabilizing | 0.998 | D | 0.825 | deleterious | None | None | None | None | I |
P/N | 0.476 | ambiguous | 0.4814 | ambiguous | -1.023 | Destabilizing | 0.956 | D | 0.798 | deleterious | None | None | None | None | I |
P/Q | 0.1346 | likely_benign | 0.1416 | benign | -1.303 | Destabilizing | 0.942 | D | 0.736 | prob.delet. | N | 0.485994001 | None | None | I |
P/R | 0.1582 | likely_benign | 0.1619 | benign | -0.583 | Destabilizing | 0.89 | D | 0.808 | deleterious | N | 0.506251076 | None | None | I |
P/S | 0.1153 | likely_benign | 0.1183 | benign | -1.499 | Destabilizing | 0.698 | D | 0.702 | prob.neutral | D | 0.525466276 | None | None | I |
P/T | 0.1374 | likely_benign | 0.1384 | benign | -1.426 | Destabilizing | 0.822 | D | 0.713 | prob.delet. | N | 0.511784484 | None | None | I |
P/V | 0.2017 | likely_benign | 0.1889 | benign | -1.061 | Destabilizing | 0.86 | D | 0.787 | deleterious | None | None | None | None | I |
P/W | 0.7306 | likely_pathogenic | 0.7099 | pathogenic | -1.528 | Destabilizing | 0.998 | D | 0.858 | deleterious | None | None | None | None | I |
P/Y | 0.4864 | ambiguous | 0.48 | ambiguous | -1.225 | Destabilizing | 0.993 | D | 0.856 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.