Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28558 | 85897;85898;85899 | chr2:178560460;178560459;178560458 | chr2:179425187;179425186;179425185 |
N2AB | 26917 | 80974;80975;80976 | chr2:178560460;178560459;178560458 | chr2:179425187;179425186;179425185 |
N2A | 25990 | 78193;78194;78195 | chr2:178560460;178560459;178560458 | chr2:179425187;179425186;179425185 |
N2B | 19493 | 58702;58703;58704 | chr2:178560460;178560459;178560458 | chr2:179425187;179425186;179425185 |
Novex-1 | 19618 | 59077;59078;59079 | chr2:178560460;178560459;178560458 | chr2:179425187;179425186;179425185 |
Novex-2 | 19685 | 59278;59279;59280 | chr2:178560460;178560459;178560458 | chr2:179425187;179425186;179425185 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | None | None | 0.989 | N | 0.637 | 0.457 | 0.376216005999 | gnomAD-4.0.0 | 1.59197E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85865E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.239 | likely_benign | 0.2035 | benign | -0.446 | Destabilizing | 0.989 | D | 0.637 | neutral | N | 0.482307016 | None | None | N |
E/C | 0.8443 | likely_pathogenic | 0.7923 | pathogenic | 0.023 | Stabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | N |
E/D | 0.2126 | likely_benign | 0.194 | benign | -0.42 | Destabilizing | 0.989 | D | 0.5 | neutral | N | 0.480914664 | None | None | N |
E/F | 0.8038 | likely_pathogenic | 0.7239 | pathogenic | -0.297 | Destabilizing | 1.0 | D | 0.768 | deleterious | None | None | None | None | N |
E/G | 0.3352 | likely_benign | 0.2874 | benign | -0.67 | Destabilizing | 0.998 | D | 0.707 | prob.neutral | N | 0.509565531 | None | None | N |
E/H | 0.5001 | ambiguous | 0.4187 | ambiguous | -0.223 | Destabilizing | 1.0 | D | 0.672 | neutral | None | None | None | None | N |
E/I | 0.3811 | ambiguous | 0.3019 | benign | 0.118 | Stabilizing | 1.0 | D | 0.785 | deleterious | None | None | None | None | N |
E/K | 0.2505 | likely_benign | 0.1905 | benign | 0.332 | Stabilizing | 0.978 | D | 0.532 | neutral | N | 0.493908431 | None | None | N |
E/L | 0.4623 | ambiguous | 0.3727 | ambiguous | 0.118 | Stabilizing | 0.999 | D | 0.724 | prob.delet. | None | None | None | None | N |
E/M | 0.4798 | ambiguous | 0.3996 | ambiguous | 0.313 | Stabilizing | 1.0 | D | 0.772 | deleterious | None | None | None | None | N |
E/N | 0.3599 | ambiguous | 0.2936 | benign | -0.049 | Destabilizing | 0.999 | D | 0.663 | neutral | None | None | None | None | N |
E/P | 0.9553 | likely_pathogenic | 0.9512 | pathogenic | -0.049 | Destabilizing | 1.0 | D | 0.796 | deleterious | None | None | None | None | N |
E/Q | 0.1407 | likely_benign | 0.1165 | benign | 0.003 | Stabilizing | 0.775 | D | 0.359 | neutral | N | 0.505992294 | None | None | N |
E/R | 0.3649 | ambiguous | 0.2932 | benign | 0.473 | Stabilizing | 0.998 | D | 0.662 | neutral | None | None | None | None | N |
E/S | 0.2826 | likely_benign | 0.2338 | benign | -0.203 | Destabilizing | 0.992 | D | 0.582 | neutral | None | None | None | None | N |
E/T | 0.2449 | likely_benign | 0.1958 | benign | -0.016 | Destabilizing | 0.999 | D | 0.762 | deleterious | None | None | None | None | N |
E/V | 0.2266 | likely_benign | 0.1839 | benign | -0.049 | Destabilizing | 0.998 | D | 0.735 | prob.delet. | N | 0.466582618 | None | None | N |
E/W | 0.9229 | likely_pathogenic | 0.8938 | pathogenic | -0.128 | Destabilizing | 1.0 | D | 0.791 | deleterious | None | None | None | None | N |
E/Y | 0.6951 | likely_pathogenic | 0.6159 | pathogenic | -0.045 | Destabilizing | 1.0 | D | 0.787 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.