Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28559 | 85900;85901;85902 | chr2:178560457;178560456;178560455 | chr2:179425184;179425183;179425182 |
N2AB | 26918 | 80977;80978;80979 | chr2:178560457;178560456;178560455 | chr2:179425184;179425183;179425182 |
N2A | 25991 | 78196;78197;78198 | chr2:178560457;178560456;178560455 | chr2:179425184;179425183;179425182 |
N2B | 19494 | 58705;58706;58707 | chr2:178560457;178560456;178560455 | chr2:179425184;179425183;179425182 |
Novex-1 | 19619 | 59080;59081;59082 | chr2:178560457;178560456;178560455 | chr2:179425184;179425183;179425182 |
Novex-2 | 19686 | 59281;59282;59283 | chr2:178560457;178560456;178560455 | chr2:179425184;179425183;179425182 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/V | rs1156788911 | -1.212 | None | N | 0.168 | 0.078 | 0.20549828249 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.9E-06 | 0 |
I/V | rs1156788911 | -1.212 | None | N | 0.168 | 0.078 | 0.20549828249 | gnomAD-4.0.0 | 1.59185E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85863E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.669 | likely_pathogenic | 0.6136 | pathogenic | -2.493 | Highly Destabilizing | 0.116 | N | 0.509 | neutral | None | None | None | None | N |
I/C | 0.7779 | likely_pathogenic | 0.7621 | pathogenic | -1.745 | Destabilizing | 0.944 | D | 0.611 | neutral | None | None | None | None | N |
I/D | 0.9596 | likely_pathogenic | 0.945 | pathogenic | -2.451 | Highly Destabilizing | 0.818 | D | 0.707 | prob.neutral | None | None | None | None | N |
I/E | 0.9205 | likely_pathogenic | 0.8958 | pathogenic | -2.254 | Highly Destabilizing | 0.818 | D | 0.706 | prob.neutral | None | None | None | None | N |
I/F | 0.3789 | ambiguous | 0.3044 | benign | -1.514 | Destabilizing | 0.627 | D | 0.589 | neutral | N | 0.491254915 | None | None | N |
I/G | 0.9187 | likely_pathogenic | 0.8928 | pathogenic | -3.031 | Highly Destabilizing | 0.818 | D | 0.709 | prob.delet. | None | None | None | None | N |
I/H | 0.9176 | likely_pathogenic | 0.8845 | pathogenic | -2.404 | Highly Destabilizing | 0.981 | D | 0.693 | prob.neutral | None | None | None | None | N |
I/K | 0.8472 | likely_pathogenic | 0.8212 | pathogenic | -1.9 | Destabilizing | 0.818 | D | 0.709 | prob.delet. | None | None | None | None | N |
I/L | 0.22 | likely_benign | 0.1857 | benign | -0.96 | Destabilizing | 0.001 | N | 0.213 | neutral | N | 0.474266665 | None | None | N |
I/M | 0.1718 | likely_benign | 0.1547 | benign | -0.82 | Destabilizing | 0.627 | D | 0.57 | neutral | N | 0.471675181 | None | None | N |
I/N | 0.6884 | likely_pathogenic | 0.6313 | pathogenic | -2.102 | Highly Destabilizing | 0.912 | D | 0.713 | prob.delet. | N | 0.500414952 | None | None | N |
I/P | 0.8127 | likely_pathogenic | 0.7931 | pathogenic | -1.449 | Destabilizing | 0.932 | D | 0.706 | prob.neutral | None | None | None | None | N |
I/Q | 0.8929 | likely_pathogenic | 0.8583 | pathogenic | -2.007 | Highly Destabilizing | 0.932 | D | 0.709 | prob.delet. | None | None | None | None | N |
I/R | 0.8287 | likely_pathogenic | 0.79 | pathogenic | -1.572 | Destabilizing | 0.818 | D | 0.713 | prob.delet. | None | None | None | None | N |
I/S | 0.771 | likely_pathogenic | 0.7004 | pathogenic | -2.849 | Highly Destabilizing | 0.627 | D | 0.649 | neutral | N | 0.476941873 | None | None | N |
I/T | 0.6771 | likely_pathogenic | 0.6163 | pathogenic | -2.498 | Highly Destabilizing | 0.324 | N | 0.598 | neutral | N | 0.473409927 | None | None | N |
I/V | 0.0882 | likely_benign | 0.079 | benign | -1.449 | Destabilizing | None | N | 0.168 | neutral | N | 0.372656876 | None | None | N |
I/W | 0.9417 | likely_pathogenic | 0.9246 | pathogenic | -1.834 | Destabilizing | 0.981 | D | 0.718 | prob.delet. | None | None | None | None | N |
I/Y | 0.7853 | likely_pathogenic | 0.727 | pathogenic | -1.565 | Destabilizing | 0.818 | D | 0.627 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.