Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28562 | 85909;85910;85911 | chr2:178560448;178560447;178560446 | chr2:179425175;179425174;179425173 |
N2AB | 26921 | 80986;80987;80988 | chr2:178560448;178560447;178560446 | chr2:179425175;179425174;179425173 |
N2A | 25994 | 78205;78206;78207 | chr2:178560448;178560447;178560446 | chr2:179425175;179425174;179425173 |
N2B | 19497 | 58714;58715;58716 | chr2:178560448;178560447;178560446 | chr2:179425175;179425174;179425173 |
Novex-1 | 19622 | 59089;59090;59091 | chr2:178560448;178560447;178560446 | chr2:179425175;179425174;179425173 |
Novex-2 | 19689 | 59290;59291;59292 | chr2:178560448;178560447;178560446 | chr2:179425175;179425174;179425173 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/M | None | None | 0.998 | N | 0.639 | 0.418 | 0.504604281553 | gnomAD-4.0.0 | 1.59183E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.77824E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.3128 | likely_benign | 0.2706 | benign | -1.292 | Destabilizing | 0.994 | D | 0.439 | neutral | N | 0.517348225 | None | None | N |
V/C | 0.7642 | likely_pathogenic | 0.7364 | pathogenic | -1.45 | Destabilizing | 1.0 | D | 0.712 | prob.delet. | None | None | None | None | N |
V/D | 0.7966 | likely_pathogenic | 0.7574 | pathogenic | -1.673 | Destabilizing | 1.0 | D | 0.803 | deleterious | None | None | None | None | N |
V/E | 0.6085 | likely_pathogenic | 0.5543 | ambiguous | -1.697 | Destabilizing | 0.999 | D | 0.757 | deleterious | N | 0.512037974 | None | None | N |
V/F | 0.3677 | ambiguous | 0.306 | benign | -1.44 | Destabilizing | 0.999 | D | 0.733 | prob.delet. | None | None | None | None | N |
V/G | 0.475 | ambiguous | 0.4323 | ambiguous | -1.54 | Destabilizing | 0.999 | D | 0.792 | deleterious | N | 0.510596397 | None | None | N |
V/H | 0.7913 | likely_pathogenic | 0.7481 | pathogenic | -1.197 | Destabilizing | 1.0 | D | 0.801 | deleterious | None | None | None | None | N |
V/I | 0.0711 | likely_benign | 0.0679 | benign | -0.717 | Destabilizing | 0.611 | D | 0.202 | neutral | None | None | None | None | N |
V/K | 0.5163 | ambiguous | 0.4924 | ambiguous | -0.999 | Destabilizing | 1.0 | D | 0.757 | deleterious | None | None | None | None | N |
V/L | 0.3468 | ambiguous | 0.2866 | benign | -0.717 | Destabilizing | 0.948 | D | 0.313 | neutral | N | 0.472257838 | None | None | N |
V/M | 0.2185 | likely_benign | 0.1848 | benign | -0.676 | Destabilizing | 0.998 | D | 0.639 | neutral | N | 0.510089418 | None | None | N |
V/N | 0.5876 | likely_pathogenic | 0.5156 | ambiguous | -0.946 | Destabilizing | 1.0 | D | 0.803 | deleterious | None | None | None | None | N |
V/P | 0.8413 | likely_pathogenic | 0.8331 | pathogenic | -0.877 | Destabilizing | 1.0 | D | 0.774 | deleterious | None | None | None | None | N |
V/Q | 0.5282 | ambiguous | 0.4723 | ambiguous | -1.205 | Destabilizing | 1.0 | D | 0.771 | deleterious | None | None | None | None | N |
V/R | 0.4711 | ambiguous | 0.4519 | ambiguous | -0.545 | Destabilizing | 1.0 | D | 0.801 | deleterious | None | None | None | None | N |
V/S | 0.4271 | ambiguous | 0.3653 | ambiguous | -1.409 | Destabilizing | 1.0 | D | 0.755 | deleterious | None | None | None | None | N |
V/T | 0.2802 | likely_benign | 0.2387 | benign | -1.329 | Destabilizing | 0.996 | D | 0.524 | neutral | None | None | None | None | N |
V/W | 0.9385 | likely_pathogenic | 0.9228 | pathogenic | -1.594 | Destabilizing | 1.0 | D | 0.801 | deleterious | None | None | None | None | N |
V/Y | 0.7675 | likely_pathogenic | 0.7073 | pathogenic | -1.22 | Destabilizing | 1.0 | D | 0.754 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.