Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28565 | 85918;85919;85920 | chr2:178560439;178560438;178560437 | chr2:179425166;179425165;179425164 |
N2AB | 26924 | 80995;80996;80997 | chr2:178560439;178560438;178560437 | chr2:179425166;179425165;179425164 |
N2A | 25997 | 78214;78215;78216 | chr2:178560439;178560438;178560437 | chr2:179425166;179425165;179425164 |
N2B | 19500 | 58723;58724;58725 | chr2:178560439;178560438;178560437 | chr2:179425166;179425165;179425164 |
Novex-1 | 19625 | 59098;59099;59100 | chr2:178560439;178560438;178560437 | chr2:179425166;179425165;179425164 |
Novex-2 | 19692 | 59299;59300;59301 | chr2:178560439;178560438;178560437 | chr2:179425166;179425165;179425164 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/Q | rs1703203626 | None | 0.117 | N | 0.451 | 0.14 | 0.128392430309 | gnomAD-4.0.0 | 1.59174E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 2.41196E-04 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1763 | likely_benign | 0.18 | benign | -0.633 | Destabilizing | 0.062 | N | 0.435 | neutral | N | 0.468418128 | None | None | N |
E/C | 0.7808 | likely_pathogenic | 0.7772 | pathogenic | -0.002 | Destabilizing | 0.935 | D | 0.585 | neutral | None | None | None | None | N |
E/D | 0.0656 | likely_benign | 0.055 | benign | -0.565 | Destabilizing | None | N | 0.109 | neutral | N | 0.3178251 | None | None | N |
E/F | 0.6744 | likely_pathogenic | 0.6835 | pathogenic | -0.589 | Destabilizing | 0.791 | D | 0.463 | neutral | None | None | None | None | N |
E/G | 0.1499 | likely_benign | 0.1613 | benign | -0.865 | Destabilizing | 0.062 | N | 0.45 | neutral | N | 0.418509382 | None | None | N |
E/H | 0.4659 | ambiguous | 0.5089 | ambiguous | -0.691 | Destabilizing | 0.555 | D | 0.375 | neutral | None | None | None | None | N |
E/I | 0.4445 | ambiguous | 0.4299 | ambiguous | -0.042 | Destabilizing | 0.555 | D | 0.462 | neutral | None | None | None | None | N |
E/K | 0.3041 | likely_benign | 0.3811 | ambiguous | 0.137 | Stabilizing | None | N | 0.255 | neutral | N | 0.443655756 | None | None | N |
E/L | 0.4311 | ambiguous | 0.4378 | ambiguous | -0.042 | Destabilizing | 0.38 | N | 0.429 | neutral | None | None | None | None | N |
E/M | 0.51 | ambiguous | 0.5171 | ambiguous | 0.332 | Stabilizing | 0.935 | D | 0.423 | neutral | None | None | None | None | N |
E/N | 0.1594 | likely_benign | 0.1476 | benign | -0.155 | Destabilizing | 0.001 | N | 0.255 | neutral | None | None | None | None | N |
E/P | 0.8526 | likely_pathogenic | 0.8621 | pathogenic | -0.218 | Destabilizing | 0.555 | D | 0.434 | neutral | None | None | None | None | N |
E/Q | 0.2052 | likely_benign | 0.2405 | benign | -0.135 | Destabilizing | 0.117 | N | 0.451 | neutral | N | 0.443367755 | None | None | N |
E/R | 0.4172 | ambiguous | 0.5104 | ambiguous | 0.215 | Stabilizing | 0.235 | N | 0.377 | neutral | None | None | None | None | N |
E/S | 0.1703 | likely_benign | 0.1637 | benign | -0.353 | Destabilizing | 0.081 | N | 0.415 | neutral | None | None | None | None | N |
E/T | 0.1921 | likely_benign | 0.1899 | benign | -0.163 | Destabilizing | 0.149 | N | 0.426 | neutral | None | None | None | None | N |
E/V | 0.2672 | likely_benign | 0.2695 | benign | -0.218 | Destabilizing | 0.317 | N | 0.411 | neutral | N | 0.503608137 | None | None | N |
E/W | 0.8724 | likely_pathogenic | 0.8931 | pathogenic | -0.43 | Destabilizing | 0.935 | D | 0.617 | neutral | None | None | None | None | N |
E/Y | 0.4926 | ambiguous | 0.4975 | ambiguous | -0.341 | Destabilizing | 0.791 | D | 0.442 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.