Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28567 | 85924;85925;85926 | chr2:178560433;178560432;178560431 | chr2:179425160;179425159;179425158 |
N2AB | 26926 | 81001;81002;81003 | chr2:178560433;178560432;178560431 | chr2:179425160;179425159;179425158 |
N2A | 25999 | 78220;78221;78222 | chr2:178560433;178560432;178560431 | chr2:179425160;179425159;179425158 |
N2B | 19502 | 58729;58730;58731 | chr2:178560433;178560432;178560431 | chr2:179425160;179425159;179425158 |
Novex-1 | 19627 | 59104;59105;59106 | chr2:178560433;178560432;178560431 | chr2:179425160;179425159;179425158 |
Novex-2 | 19694 | 59305;59306;59307 | chr2:178560433;178560432;178560431 | chr2:179425160;179425159;179425158 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
M/K | None | None | 0.684 | N | 0.785 | 0.483 | 0.613916450604 | gnomAD-4.0.0 | 6.84268E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99475E-07 | 0 | 0 |
M/T | None | None | 0.684 | N | 0.746 | 0.402 | 0.758402455312 | gnomAD-4.0.0 | 1.36854E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.15958E-05 | 1.65689E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
M/A | 0.7011 | likely_pathogenic | 0.6694 | pathogenic | -1.979 | Destabilizing | 0.004 | N | 0.499 | neutral | None | None | None | None | N |
M/C | 0.8519 | likely_pathogenic | 0.8494 | pathogenic | -2.531 | Highly Destabilizing | 0.953 | D | 0.796 | deleterious | None | None | None | None | N |
M/D | 0.9974 | likely_pathogenic | 0.9972 | pathogenic | -1.851 | Destabilizing | 0.953 | D | 0.807 | deleterious | None | None | None | None | N |
M/E | 0.9734 | likely_pathogenic | 0.9719 | pathogenic | -1.613 | Destabilizing | 0.742 | D | 0.778 | deleterious | None | None | None | None | N |
M/F | 0.769 | likely_pathogenic | 0.7745 | pathogenic | -0.696 | Destabilizing | 0.742 | D | 0.719 | prob.delet. | None | None | None | None | N |
M/G | 0.9578 | likely_pathogenic | 0.9551 | pathogenic | -2.464 | Highly Destabilizing | 0.59 | D | 0.775 | deleterious | None | None | None | None | N |
M/H | 0.9795 | likely_pathogenic | 0.9808 | pathogenic | -2.219 | Highly Destabilizing | 0.996 | D | 0.783 | deleterious | None | None | None | None | N |
M/I | 0.5726 | likely_pathogenic | 0.5381 | ambiguous | -0.591 | Destabilizing | 0.007 | N | 0.355 | neutral | N | 0.416708723 | None | None | N |
M/K | 0.9284 | likely_pathogenic | 0.9288 | pathogenic | -1.132 | Destabilizing | 0.684 | D | 0.785 | deleterious | N | 0.504571419 | None | None | N |
M/L | 0.3506 | ambiguous | 0.3509 | ambiguous | -0.591 | Destabilizing | 0.078 | N | 0.452 | neutral | N | 0.452477522 | None | None | N |
M/N | 0.971 | likely_pathogenic | 0.9695 | pathogenic | -1.566 | Destabilizing | 0.953 | D | 0.812 | deleterious | None | None | None | None | N |
M/P | 0.9978 | likely_pathogenic | 0.9973 | pathogenic | -1.035 | Destabilizing | 0.953 | D | 0.807 | deleterious | None | None | None | None | N |
M/Q | 0.8316 | likely_pathogenic | 0.8387 | pathogenic | -1.226 | Destabilizing | 0.953 | D | 0.721 | prob.delet. | None | None | None | None | N |
M/R | 0.9359 | likely_pathogenic | 0.932 | pathogenic | -1.379 | Destabilizing | 0.939 | D | 0.833 | deleterious | N | 0.49305053 | None | None | N |
M/S | 0.8697 | likely_pathogenic | 0.851 | pathogenic | -2.142 | Highly Destabilizing | 0.59 | D | 0.733 | prob.delet. | None | None | None | None | N |
M/T | 0.8032 | likely_pathogenic | 0.7707 | pathogenic | -1.761 | Destabilizing | 0.684 | D | 0.746 | deleterious | N | 0.492543551 | None | None | N |
M/V | 0.136 | likely_benign | 0.1339 | benign | -1.035 | Destabilizing | 0.164 | N | 0.44 | neutral | N | 0.376072822 | None | None | N |
M/W | 0.9897 | likely_pathogenic | 0.9888 | pathogenic | -1.009 | Destabilizing | 0.996 | D | 0.765 | deleterious | None | None | None | None | N |
M/Y | 0.9766 | likely_pathogenic | 0.9768 | pathogenic | -0.926 | Destabilizing | 0.984 | D | 0.827 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.