Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28577 | 85954;85955;85956 | chr2:178560403;178560402;178560401 | chr2:179425130;179425129;179425128 |
N2AB | 26936 | 81031;81032;81033 | chr2:178560403;178560402;178560401 | chr2:179425130;179425129;179425128 |
N2A | 26009 | 78250;78251;78252 | chr2:178560403;178560402;178560401 | chr2:179425130;179425129;179425128 |
N2B | 19512 | 58759;58760;58761 | chr2:178560403;178560402;178560401 | chr2:179425130;179425129;179425128 |
Novex-1 | 19637 | 59134;59135;59136 | chr2:178560403;178560402;178560401 | chr2:179425130;179425129;179425128 |
Novex-2 | 19704 | 59335;59336;59337 | chr2:178560403;178560402;178560401 | chr2:179425130;179425129;179425128 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/E | None | None | 1.0 | N | 0.448 | 0.314 | 0.388010793773 | gnomAD-4.0.0 | 1.36851E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 2.31879E-05 | 0 |
D/N | None | None | 1.0 | N | 0.696 | 0.361 | 0.394230963961 | gnomAD-4.0.0 | 1.5915E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85817E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.6124 | likely_pathogenic | 0.6447 | pathogenic | -0.408 | Destabilizing | 1.0 | D | 0.719 | prob.delet. | N | 0.504085029 | None | None | I |
D/C | 0.8938 | likely_pathogenic | 0.9052 | pathogenic | 0.145 | Stabilizing | 1.0 | D | 0.654 | neutral | None | None | None | None | I |
D/E | 0.7255 | likely_pathogenic | 0.7402 | pathogenic | -0.595 | Destabilizing | 1.0 | D | 0.448 | neutral | N | 0.49945022 | None | None | I |
D/F | 0.9389 | likely_pathogenic | 0.9499 | pathogenic | -0.768 | Destabilizing | 1.0 | D | 0.645 | neutral | None | None | None | None | I |
D/G | 0.5886 | likely_pathogenic | 0.6122 | pathogenic | -0.621 | Destabilizing | 1.0 | D | 0.7 | prob.neutral | N | 0.503630956 | None | None | I |
D/H | 0.7371 | likely_pathogenic | 0.766 | pathogenic | -1.058 | Destabilizing | 1.0 | D | 0.65 | neutral | N | 0.507149675 | None | None | I |
D/I | 0.8568 | likely_pathogenic | 0.8848 | pathogenic | 0.11 | Stabilizing | 1.0 | D | 0.675 | prob.neutral | None | None | None | None | I |
D/K | 0.8754 | likely_pathogenic | 0.8927 | pathogenic | 0.183 | Stabilizing | 1.0 | D | 0.74 | deleterious | None | None | None | None | I |
D/L | 0.8617 | likely_pathogenic | 0.8775 | pathogenic | 0.11 | Stabilizing | 1.0 | D | 0.695 | prob.neutral | None | None | None | None | I |
D/M | 0.9295 | likely_pathogenic | 0.9407 | pathogenic | 0.6 | Stabilizing | 1.0 | D | 0.643 | neutral | None | None | None | None | I |
D/N | 0.1279 | likely_benign | 0.1344 | benign | -0.064 | Destabilizing | 1.0 | D | 0.696 | prob.neutral | N | 0.519540381 | None | None | I |
D/P | 0.9396 | likely_pathogenic | 0.9414 | pathogenic | -0.041 | Destabilizing | 1.0 | D | 0.737 | prob.delet. | None | None | None | None | I |
D/Q | 0.8576 | likely_pathogenic | 0.875 | pathogenic | -0.042 | Destabilizing | 1.0 | D | 0.731 | prob.delet. | None | None | None | None | I |
D/R | 0.8618 | likely_pathogenic | 0.8814 | pathogenic | 0.023 | Stabilizing | 1.0 | D | 0.703 | prob.neutral | None | None | None | None | I |
D/S | 0.2532 | likely_benign | 0.2825 | benign | -0.188 | Destabilizing | 1.0 | D | 0.709 | prob.delet. | None | None | None | None | I |
D/T | 0.4402 | ambiguous | 0.5083 | ambiguous | -0.012 | Destabilizing | 1.0 | D | 0.749 | deleterious | None | None | None | None | I |
D/V | 0.7119 | likely_pathogenic | 0.7601 | pathogenic | -0.041 | Destabilizing | 1.0 | D | 0.699 | prob.neutral | N | 0.515859408 | None | None | I |
D/W | 0.9861 | likely_pathogenic | 0.9881 | pathogenic | -0.762 | Destabilizing | 1.0 | D | 0.648 | neutral | None | None | None | None | I |
D/Y | 0.6755 | likely_pathogenic | 0.7177 | pathogenic | -0.555 | Destabilizing | 1.0 | D | 0.628 | neutral | D | 0.551360356 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.