Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28581 | 85966;85967;85968 | chr2:178560391;178560390;178560389 | chr2:179425118;179425117;179425116 |
N2AB | 26940 | 81043;81044;81045 | chr2:178560391;178560390;178560389 | chr2:179425118;179425117;179425116 |
N2A | 26013 | 78262;78263;78264 | chr2:178560391;178560390;178560389 | chr2:179425118;179425117;179425116 |
N2B | 19516 | 58771;58772;58773 | chr2:178560391;178560390;178560389 | chr2:179425118;179425117;179425116 |
Novex-1 | 19641 | 59146;59147;59148 | chr2:178560391;178560390;178560389 | chr2:179425118;179425117;179425116 |
Novex-2 | 19708 | 59347;59348;59349 | chr2:178560391;178560390;178560389 | chr2:179425118;179425117;179425116 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/Q | None | None | 0.117 | N | 0.413 | 0.108 | 0.201204373187 | gnomAD-4.0.0 | 1.59146E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.8582E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1399 | likely_benign | 0.1238 | benign | -0.147 | Destabilizing | 0.027 | N | 0.438 | neutral | N | 0.502301415 | None | None | I |
E/C | 0.7348 | likely_pathogenic | 0.6797 | pathogenic | 0.127 | Stabilizing | 0.935 | D | 0.449 | neutral | None | None | None | None | I |
E/D | 0.0873 | likely_benign | 0.0757 | benign | -0.132 | Destabilizing | None | N | 0.112 | neutral | N | 0.48992955 | None | None | I |
E/F | 0.6813 | likely_pathogenic | 0.6363 | pathogenic | -0.174 | Destabilizing | 0.791 | D | 0.466 | neutral | None | None | None | None | I |
E/G | 0.1672 | likely_benign | 0.1459 | benign | -0.295 | Destabilizing | 0.052 | N | 0.471 | neutral | N | 0.518521661 | None | None | I |
E/H | 0.4021 | ambiguous | 0.3477 | ambiguous | 0.16 | Stabilizing | 0.555 | D | 0.42 | neutral | None | None | None | None | I |
E/I | 0.3281 | likely_benign | 0.2973 | benign | 0.19 | Stabilizing | 0.555 | D | 0.487 | neutral | None | None | None | None | I |
E/K | 0.1414 | likely_benign | 0.1239 | benign | 0.567 | Stabilizing | 0.117 | N | 0.373 | neutral | N | 0.496932881 | None | None | I |
E/L | 0.3524 | ambiguous | 0.3144 | benign | 0.19 | Stabilizing | 0.149 | N | 0.464 | neutral | None | None | None | None | I |
E/M | 0.4249 | ambiguous | 0.3913 | ambiguous | 0.219 | Stabilizing | 0.935 | D | 0.463 | neutral | None | None | None | None | I |
E/N | 0.1857 | likely_benign | 0.1535 | benign | 0.344 | Stabilizing | 0.081 | N | 0.384 | neutral | None | None | None | None | I |
E/P | 0.2462 | likely_benign | 0.2108 | benign | 0.097 | Stabilizing | 0.001 | N | 0.305 | neutral | None | None | None | None | I |
E/Q | 0.147 | likely_benign | 0.1387 | benign | 0.362 | Stabilizing | 0.117 | N | 0.413 | neutral | N | 0.469864755 | None | None | I |
E/R | 0.224 | likely_benign | 0.209 | benign | 0.686 | Stabilizing | 0.38 | N | 0.388 | neutral | None | None | None | None | I |
E/S | 0.1651 | likely_benign | 0.1416 | benign | 0.187 | Stabilizing | 0.003 | N | 0.096 | neutral | None | None | None | None | I |
E/T | 0.214 | likely_benign | 0.1878 | benign | 0.313 | Stabilizing | 0.081 | N | 0.451 | neutral | None | None | None | None | I |
E/V | 0.1908 | likely_benign | 0.1736 | benign | 0.097 | Stabilizing | 0.211 | N | 0.461 | neutral | N | 0.487234995 | None | None | I |
E/W | 0.8568 | likely_pathogenic | 0.8193 | pathogenic | -0.095 | Destabilizing | 0.935 | D | 0.549 | neutral | None | None | None | None | I |
E/Y | 0.5141 | ambiguous | 0.4566 | ambiguous | 0.062 | Stabilizing | 0.791 | D | 0.478 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.