Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28589 | 85990;85991;85992 | chr2:178560367;178560366;178560365 | chr2:179425094;179425093;179425092 |
N2AB | 26948 | 81067;81068;81069 | chr2:178560367;178560366;178560365 | chr2:179425094;179425093;179425092 |
N2A | 26021 | 78286;78287;78288 | chr2:178560367;178560366;178560365 | chr2:179425094;179425093;179425092 |
N2B | 19524 | 58795;58796;58797 | chr2:178560367;178560366;178560365 | chr2:179425094;179425093;179425092 |
Novex-1 | 19649 | 59170;59171;59172 | chr2:178560367;178560366;178560365 | chr2:179425094;179425093;179425092 |
Novex-2 | 19716 | 59371;59372;59373 | chr2:178560367;178560366;178560365 | chr2:179425094;179425093;179425092 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/K | rs769856738 | -1.17 | 0.122 | N | 0.267 | 0.183 | 0.170165803431 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 2.9E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
R/K | rs769856738 | -1.17 | 0.122 | N | 0.267 | 0.183 | 0.170165803431 | gnomAD-4.0.0 | 3.18304E-06 | None | None | None | None | N | None | 0 | 4.57331E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.9206 | likely_pathogenic | 0.8779 | pathogenic | -2.021 | Highly Destabilizing | 0.931 | D | 0.617 | neutral | None | None | None | None | N |
R/C | 0.3544 | ambiguous | 0.2666 | benign | -1.911 | Destabilizing | 1.0 | D | 0.746 | deleterious | None | None | None | None | N |
R/D | 0.9889 | likely_pathogenic | 0.9834 | pathogenic | -1.329 | Destabilizing | 0.996 | D | 0.72 | prob.delet. | None | None | None | None | N |
R/E | 0.883 | likely_pathogenic | 0.8333 | pathogenic | -1.085 | Destabilizing | 0.97 | D | 0.641 | neutral | None | None | None | None | N |
R/F | 0.8874 | likely_pathogenic | 0.8484 | pathogenic | -1.068 | Destabilizing | 0.999 | D | 0.757 | deleterious | None | None | None | None | N |
R/G | 0.8252 | likely_pathogenic | 0.7568 | pathogenic | -2.378 | Highly Destabilizing | 0.98 | D | 0.66 | neutral | N | 0.478356997 | None | None | N |
R/H | 0.2475 | likely_benign | 0.191 | benign | -1.781 | Destabilizing | 0.999 | D | 0.662 | neutral | None | None | None | None | N |
R/I | 0.7721 | likely_pathogenic | 0.6941 | pathogenic | -0.962 | Destabilizing | 0.999 | D | 0.75 | deleterious | None | None | None | None | N |
R/K | 0.1283 | likely_benign | 0.1145 | benign | -1.097 | Destabilizing | 0.122 | N | 0.267 | neutral | N | 0.398864829 | None | None | N |
R/L | 0.6795 | likely_pathogenic | 0.5881 | pathogenic | -0.962 | Destabilizing | 0.985 | D | 0.66 | neutral | None | None | None | None | N |
R/M | 0.6621 | likely_pathogenic | 0.5865 | pathogenic | -1.497 | Destabilizing | 1.0 | D | 0.702 | prob.neutral | N | 0.511880903 | None | None | N |
R/N | 0.9624 | likely_pathogenic | 0.9427 | pathogenic | -1.564 | Destabilizing | 0.985 | D | 0.653 | neutral | None | None | None | None | N |
R/P | 0.9963 | likely_pathogenic | 0.9942 | pathogenic | -1.307 | Destabilizing | 0.999 | D | 0.739 | prob.delet. | None | None | None | None | N |
R/Q | 0.2379 | likely_benign | 0.189 | benign | -1.351 | Destabilizing | 0.97 | D | 0.691 | prob.neutral | None | None | None | None | N |
R/S | 0.948 | likely_pathogenic | 0.915 | pathogenic | -2.38 | Highly Destabilizing | 0.961 | D | 0.635 | neutral | N | 0.468633306 | None | None | N |
R/T | 0.872 | likely_pathogenic | 0.8047 | pathogenic | -1.913 | Destabilizing | 0.98 | D | 0.627 | neutral | N | 0.473722188 | None | None | N |
R/V | 0.8398 | likely_pathogenic | 0.7748 | pathogenic | -1.307 | Destabilizing | 0.996 | D | 0.732 | prob.delet. | None | None | None | None | N |
R/W | 0.4641 | ambiguous | 0.3784 | ambiguous | -0.574 | Destabilizing | 1.0 | D | 0.735 | prob.delet. | N | 0.465453301 | None | None | N |
R/Y | 0.7293 | likely_pathogenic | 0.655 | pathogenic | -0.493 | Destabilizing | 0.999 | D | 0.742 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.