Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28600 | 86023;86024;86025 | chr2:178560334;178560333;178560332 | chr2:179425061;179425060;179425059 |
N2AB | 26959 | 81100;81101;81102 | chr2:178560334;178560333;178560332 | chr2:179425061;179425060;179425059 |
N2A | 26032 | 78319;78320;78321 | chr2:178560334;178560333;178560332 | chr2:179425061;179425060;179425059 |
N2B | 19535 | 58828;58829;58830 | chr2:178560334;178560333;178560332 | chr2:179425061;179425060;179425059 |
Novex-1 | 19660 | 59203;59204;59205 | chr2:178560334;178560333;178560332 | chr2:179425061;179425060;179425059 |
Novex-2 | 19727 | 59404;59405;59406 | chr2:178560334;178560333;178560332 | chr2:179425061;179425060;179425059 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | None | None | 0.999 | N | 0.559 | 0.402 | 0.495970961353 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 6.33473E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.4262 | ambiguous | 0.4121 | ambiguous | -1.365 | Destabilizing | 0.999 | D | 0.559 | neutral | N | 0.448832289 | None | None | N |
V/C | 0.7539 | likely_pathogenic | 0.7602 | pathogenic | -0.973 | Destabilizing | 1.0 | D | 0.789 | deleterious | None | None | None | None | N |
V/D | 0.9119 | likely_pathogenic | 0.918 | pathogenic | -1.234 | Destabilizing | 1.0 | D | 0.824 | deleterious | None | None | None | None | N |
V/E | 0.8305 | likely_pathogenic | 0.8438 | pathogenic | -1.211 | Destabilizing | 1.0 | D | 0.788 | deleterious | N | 0.477863245 | None | None | N |
V/F | 0.5109 | ambiguous | 0.5142 | ambiguous | -0.965 | Destabilizing | 1.0 | D | 0.81 | deleterious | None | None | None | None | N |
V/G | 0.5674 | likely_pathogenic | 0.5723 | pathogenic | -1.702 | Destabilizing | 1.0 | D | 0.785 | deleterious | N | 0.483498785 | None | None | N |
V/H | 0.9313 | likely_pathogenic | 0.9355 | pathogenic | -1.225 | Destabilizing | 1.0 | D | 0.821 | deleterious | None | None | None | None | N |
V/I | 0.0964 | likely_benign | 0.0927 | benign | -0.538 | Destabilizing | 0.997 | D | 0.459 | neutral | N | 0.510360751 | None | None | N |
V/K | 0.9214 | likely_pathogenic | 0.9317 | pathogenic | -1.276 | Destabilizing | 1.0 | D | 0.79 | deleterious | None | None | None | None | N |
V/L | 0.4206 | ambiguous | 0.4172 | ambiguous | -0.538 | Destabilizing | 0.997 | D | 0.533 | neutral | N | 0.502202627 | None | None | N |
V/M | 0.3421 | ambiguous | 0.3313 | benign | -0.454 | Destabilizing | 1.0 | D | 0.698 | prob.neutral | None | None | None | None | N |
V/N | 0.7631 | likely_pathogenic | 0.7509 | pathogenic | -1.151 | Destabilizing | 1.0 | D | 0.829 | deleterious | None | None | None | None | N |
V/P | 0.9534 | likely_pathogenic | 0.9546 | pathogenic | -0.779 | Destabilizing | 1.0 | D | 0.809 | deleterious | None | None | None | None | N |
V/Q | 0.8247 | likely_pathogenic | 0.8326 | pathogenic | -1.263 | Destabilizing | 1.0 | D | 0.819 | deleterious | None | None | None | None | N |
V/R | 0.8947 | likely_pathogenic | 0.908 | pathogenic | -0.784 | Destabilizing | 1.0 | D | 0.829 | deleterious | None | None | None | None | N |
V/S | 0.612 | likely_pathogenic | 0.5854 | pathogenic | -1.661 | Destabilizing | 1.0 | D | 0.785 | deleterious | None | None | None | None | N |
V/T | 0.5263 | ambiguous | 0.4927 | ambiguous | -1.52 | Destabilizing | 0.999 | D | 0.581 | neutral | None | None | None | None | N |
V/W | 0.9678 | likely_pathogenic | 0.9714 | pathogenic | -1.199 | Destabilizing | 1.0 | D | 0.82 | deleterious | None | None | None | None | N |
V/Y | 0.8823 | likely_pathogenic | 0.89 | pathogenic | -0.886 | Destabilizing | 1.0 | D | 0.817 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.