Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28603 | 86032;86033;86034 | chr2:178560325;178560324;178560323 | chr2:179425052;179425051;179425050 |
N2AB | 26962 | 81109;81110;81111 | chr2:178560325;178560324;178560323 | chr2:179425052;179425051;179425050 |
N2A | 26035 | 78328;78329;78330 | chr2:178560325;178560324;178560323 | chr2:179425052;179425051;179425050 |
N2B | 19538 | 58837;58838;58839 | chr2:178560325;178560324;178560323 | chr2:179425052;179425051;179425050 |
Novex-1 | 19663 | 59212;59213;59214 | chr2:178560325;178560324;178560323 | chr2:179425052;179425051;179425050 |
Novex-2 | 19730 | 59413;59414;59415 | chr2:178560325;178560324;178560323 | chr2:179425052;179425051;179425050 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/I | None | None | 0.967 | N | 0.645 | 0.345 | 0.543209242439 | gnomAD-4.0.0 | 1.59124E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.02425E-05 |
K/N | rs778444893 | None | 0.967 | N | 0.581 | 0.232 | 0.12205267543 | gnomAD-4.0.0 | 6.84212E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 1.7343E-04 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.5526 | ambiguous | 0.4424 | ambiguous | 0.069 | Stabilizing | 0.845 | D | 0.505 | neutral | None | None | None | None | I |
K/C | 0.7584 | likely_pathogenic | 0.7023 | pathogenic | -0.333 | Destabilizing | 0.999 | D | 0.68 | prob.neutral | None | None | None | None | I |
K/D | 0.7093 | likely_pathogenic | 0.6427 | pathogenic | -0.263 | Destabilizing | 0.975 | D | 0.557 | neutral | None | None | None | None | I |
K/E | 0.4126 | ambiguous | 0.312 | benign | -0.26 | Destabilizing | 0.892 | D | 0.487 | neutral | N | 0.458547851 | None | None | I |
K/F | 0.816 | likely_pathogenic | 0.7408 | pathogenic | -0.228 | Destabilizing | 0.987 | D | 0.662 | neutral | None | None | None | None | I |
K/G | 0.6282 | likely_pathogenic | 0.5574 | ambiguous | -0.078 | Destabilizing | 0.975 | D | 0.516 | neutral | None | None | None | None | I |
K/H | 0.3653 | ambiguous | 0.3096 | benign | -0.189 | Destabilizing | 0.999 | D | 0.585 | neutral | None | None | None | None | I |
K/I | 0.4666 | ambiguous | 0.3604 | ambiguous | 0.378 | Stabilizing | 0.967 | D | 0.645 | neutral | N | 0.502570774 | None | None | I |
K/L | 0.4667 | ambiguous | 0.3646 | ambiguous | 0.378 | Stabilizing | 0.845 | D | 0.491 | neutral | None | None | None | None | I |
K/M | 0.3187 | likely_benign | 0.242 | benign | -0.104 | Destabilizing | 0.999 | D | 0.576 | neutral | None | None | None | None | I |
K/N | 0.5229 | ambiguous | 0.4424 | ambiguous | 0.123 | Stabilizing | 0.967 | D | 0.581 | neutral | N | 0.495143369 | None | None | I |
K/P | 0.8985 | likely_pathogenic | 0.858 | pathogenic | 0.299 | Stabilizing | 0.987 | D | 0.583 | neutral | None | None | None | None | I |
K/Q | 0.2056 | likely_benign | 0.1641 | benign | 0.012 | Stabilizing | 0.983 | D | 0.602 | neutral | N | 0.469996995 | None | None | I |
K/R | 0.0949 | likely_benign | 0.0886 | benign | -0.015 | Destabilizing | 0.892 | D | 0.493 | neutral | N | 0.430497245 | None | None | I |
K/S | 0.5897 | likely_pathogenic | 0.4955 | ambiguous | -0.204 | Destabilizing | 0.845 | D | 0.481 | neutral | None | None | None | None | I |
K/T | 0.2762 | likely_benign | 0.2046 | benign | -0.08 | Destabilizing | 0.025 | N | 0.336 | neutral | N | 0.447408137 | None | None | I |
K/V | 0.4411 | ambiguous | 0.3365 | benign | 0.299 | Stabilizing | 0.95 | D | 0.512 | neutral | None | None | None | None | I |
K/W | 0.7987 | likely_pathogenic | 0.7458 | pathogenic | -0.356 | Destabilizing | 0.999 | D | 0.719 | prob.delet. | None | None | None | None | I |
K/Y | 0.6283 | likely_pathogenic | 0.5679 | pathogenic | -0.002 | Destabilizing | 0.996 | D | 0.603 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.