Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28604 | 86035;86036;86037 | chr2:178560322;178560321;178560320 | chr2:179425049;179425048;179425047 |
N2AB | 26963 | 81112;81113;81114 | chr2:178560322;178560321;178560320 | chr2:179425049;179425048;179425047 |
N2A | 26036 | 78331;78332;78333 | chr2:178560322;178560321;178560320 | chr2:179425049;179425048;179425047 |
N2B | 19539 | 58840;58841;58842 | chr2:178560322;178560321;178560320 | chr2:179425049;179425048;179425047 |
Novex-1 | 19664 | 59215;59216;59217 | chr2:178560322;178560321;178560320 | chr2:179425049;179425048;179425047 |
Novex-2 | 19731 | 59416;59417;59418 | chr2:178560322;178560321;178560320 | chr2:179425049;179425048;179425047 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/T | rs1208500218 | -0.978 | 0.978 | N | 0.735 | 0.379 | 0.412328234245 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
P/T | rs1208500218 | -0.978 | 0.978 | N | 0.735 | 0.379 | 0.412328234245 | gnomAD-4.0.0 | 1.3684E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 2.31868E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.0839 | likely_benign | 0.0863 | benign | -0.827 | Destabilizing | 0.928 | D | 0.628 | neutral | N | 0.518902876 | None | None | N |
P/C | 0.5002 | ambiguous | 0.5147 | ambiguous | -0.638 | Destabilizing | 0.999 | D | 0.821 | deleterious | None | None | None | None | N |
P/D | 0.681 | likely_pathogenic | 0.6854 | pathogenic | -0.259 | Destabilizing | 0.997 | D | 0.822 | deleterious | None | None | None | None | N |
P/E | 0.4521 | ambiguous | 0.4495 | ambiguous | -0.318 | Destabilizing | 0.992 | D | 0.813 | deleterious | None | None | None | None | N |
P/F | 0.541 | ambiguous | 0.56 | ambiguous | -0.711 | Destabilizing | 0.991 | D | 0.839 | deleterious | None | None | None | None | N |
P/G | 0.4012 | ambiguous | 0.405 | ambiguous | -1.053 | Destabilizing | 0.992 | D | 0.793 | deleterious | None | None | None | None | N |
P/H | 0.2857 | likely_benign | 0.2873 | benign | -0.499 | Destabilizing | 0.999 | D | 0.801 | deleterious | None | None | None | None | N |
P/I | 0.2507 | likely_benign | 0.2793 | benign | -0.351 | Destabilizing | 0.968 | D | 0.805 | deleterious | None | None | None | None | N |
P/K | 0.3955 | ambiguous | 0.3965 | ambiguous | -0.604 | Destabilizing | 0.992 | D | 0.811 | deleterious | None | None | None | None | N |
P/L | 0.0984 | likely_benign | 0.106 | benign | -0.351 | Destabilizing | 0.085 | N | 0.518 | neutral | N | 0.456470338 | None | None | N |
P/M | 0.2419 | likely_benign | 0.2636 | benign | -0.386 | Destabilizing | 0.996 | D | 0.817 | deleterious | None | None | None | None | N |
P/N | 0.4093 | ambiguous | 0.4249 | ambiguous | -0.311 | Destabilizing | 0.997 | D | 0.837 | deleterious | None | None | None | None | N |
P/Q | 0.234 | likely_benign | 0.2347 | benign | -0.504 | Destabilizing | 0.996 | D | 0.834 | deleterious | N | 0.475914688 | None | None | N |
P/R | 0.2603 | likely_benign | 0.2596 | benign | -0.108 | Destabilizing | 0.989 | D | 0.837 | deleterious | N | 0.478824336 | None | None | N |
P/S | 0.1931 | likely_benign | 0.198 | benign | -0.804 | Destabilizing | 0.989 | D | 0.788 | deleterious | N | 0.487830608 | None | None | N |
P/T | 0.1086 | likely_benign | 0.1143 | benign | -0.751 | Destabilizing | 0.978 | D | 0.735 | prob.delet. | N | 0.471613149 | None | None | N |
P/V | 0.1613 | likely_benign | 0.1812 | benign | -0.473 | Destabilizing | 0.968 | D | 0.699 | prob.neutral | None | None | None | None | N |
P/W | 0.646 | likely_pathogenic | 0.6471 | pathogenic | -0.801 | Destabilizing | 0.999 | D | 0.825 | deleterious | None | None | None | None | N |
P/Y | 0.4785 | ambiguous | 0.4937 | ambiguous | -0.517 | Destabilizing | 0.998 | D | 0.833 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.