Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28605 | 86038;86039;86040 | chr2:178560319;178560318;178560317 | chr2:179425046;179425045;179425044 |
N2AB | 26964 | 81115;81116;81117 | chr2:178560319;178560318;178560317 | chr2:179425046;179425045;179425044 |
N2A | 26037 | 78334;78335;78336 | chr2:178560319;178560318;178560317 | chr2:179425046;179425045;179425044 |
N2B | 19540 | 58843;58844;58845 | chr2:178560319;178560318;178560317 | chr2:179425046;179425045;179425044 |
Novex-1 | 19665 | 59218;59219;59220 | chr2:178560319;178560318;178560317 | chr2:179425046;179425045;179425044 |
Novex-2 | 19732 | 59419;59420;59421 | chr2:178560319;178560318;178560317 | chr2:179425046;179425045;179425044 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/L | None | None | 0.618 | N | 0.473 | 0.177 | 0.303453137403 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.3713 | ambiguous | 0.3237 | benign | -1.551 | Destabilizing | 0.958 | D | 0.533 | neutral | N | 0.465088134 | None | None | N |
V/C | 0.7716 | likely_pathogenic | 0.7537 | pathogenic | -0.906 | Destabilizing | 1.0 | D | 0.778 | deleterious | None | None | None | None | N |
V/D | 0.9103 | likely_pathogenic | 0.8763 | pathogenic | -2.098 | Highly Destabilizing | 0.998 | D | 0.81 | deleterious | N | 0.480697174 | None | None | N |
V/E | 0.8092 | likely_pathogenic | 0.7655 | pathogenic | -1.874 | Destabilizing | 0.998 | D | 0.745 | deleterious | None | None | None | None | N |
V/F | 0.4272 | ambiguous | 0.3926 | ambiguous | -0.86 | Destabilizing | 0.988 | D | 0.755 | deleterious | N | 0.488841156 | None | None | N |
V/G | 0.5341 | ambiguous | 0.4699 | ambiguous | -2.076 | Highly Destabilizing | 0.994 | D | 0.777 | deleterious | N | 0.509534032 | None | None | N |
V/H | 0.8912 | likely_pathogenic | 0.8767 | pathogenic | -1.958 | Destabilizing | 1.0 | D | 0.821 | deleterious | None | None | None | None | N |
V/I | 0.0853 | likely_benign | 0.0866 | benign | -0.1 | Destabilizing | 0.067 | N | 0.332 | neutral | N | 0.444330547 | None | None | N |
V/K | 0.8306 | likely_pathogenic | 0.8077 | pathogenic | -1.263 | Destabilizing | 0.995 | D | 0.75 | deleterious | None | None | None | None | N |
V/L | 0.301 | likely_benign | 0.2781 | benign | -0.1 | Destabilizing | 0.618 | D | 0.473 | neutral | N | 0.507899236 | None | None | N |
V/M | 0.2703 | likely_benign | 0.2538 | benign | -0.11 | Destabilizing | 0.991 | D | 0.727 | prob.delet. | None | None | None | None | N |
V/N | 0.7367 | likely_pathogenic | 0.697 | pathogenic | -1.585 | Destabilizing | 0.998 | D | 0.828 | deleterious | None | None | None | None | N |
V/P | 0.9405 | likely_pathogenic | 0.9107 | pathogenic | -0.555 | Destabilizing | 0.998 | D | 0.796 | deleterious | None | None | None | None | N |
V/Q | 0.7279 | likely_pathogenic | 0.6967 | pathogenic | -1.4 | Destabilizing | 0.998 | D | 0.814 | deleterious | None | None | None | None | N |
V/R | 0.7668 | likely_pathogenic | 0.7333 | pathogenic | -1.219 | Destabilizing | 0.998 | D | 0.827 | deleterious | None | None | None | None | N |
V/S | 0.5165 | ambiguous | 0.4644 | ambiguous | -2.153 | Highly Destabilizing | 0.995 | D | 0.744 | deleterious | None | None | None | None | N |
V/T | 0.3968 | ambiguous | 0.3474 | ambiguous | -1.787 | Destabilizing | 0.968 | D | 0.626 | neutral | None | None | None | None | N |
V/W | 0.9632 | likely_pathogenic | 0.9543 | pathogenic | -1.442 | Destabilizing | 1.0 | D | 0.8 | deleterious | None | None | None | None | N |
V/Y | 0.8462 | likely_pathogenic | 0.825 | pathogenic | -0.954 | Destabilizing | 0.995 | D | 0.787 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.