Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28615 | 86068;86069;86070 | chr2:178560289;178560288;178560287 | chr2:179425016;179425015;179425014 |
N2AB | 26974 | 81145;81146;81147 | chr2:178560289;178560288;178560287 | chr2:179425016;179425015;179425014 |
N2A | 26047 | 78364;78365;78366 | chr2:178560289;178560288;178560287 | chr2:179425016;179425015;179425014 |
N2B | 19550 | 58873;58874;58875 | chr2:178560289;178560288;178560287 | chr2:179425016;179425015;179425014 |
Novex-1 | 19675 | 59248;59249;59250 | chr2:178560289;178560288;178560287 | chr2:179425016;179425015;179425014 |
Novex-2 | 19742 | 59449;59450;59451 | chr2:178560289;178560288;178560287 | chr2:179425016;179425015;179425014 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/F | rs978201175 | None | 1.0 | D | 0.868 | 0.648 | 0.858355847791 | gnomAD-4.0.0 | 2.7368E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.59786E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.9433 | likely_pathogenic | 0.9442 | pathogenic | -2.561 | Highly Destabilizing | 0.999 | D | 0.828 | deleterious | None | None | None | None | N |
L/C | 0.8978 | likely_pathogenic | 0.9075 | pathogenic | -1.969 | Destabilizing | 1.0 | D | 0.803 | deleterious | None | None | None | None | N |
L/D | 0.9984 | likely_pathogenic | 0.9989 | pathogenic | -2.643 | Highly Destabilizing | 1.0 | D | 0.86 | deleterious | None | None | None | None | N |
L/E | 0.9878 | likely_pathogenic | 0.9911 | pathogenic | -2.541 | Highly Destabilizing | 1.0 | D | 0.853 | deleterious | None | None | None | None | N |
L/F | 0.7053 | likely_pathogenic | 0.7117 | pathogenic | -1.833 | Destabilizing | 1.0 | D | 0.868 | deleterious | D | 0.658475631 | None | None | N |
L/G | 0.9835 | likely_pathogenic | 0.9848 | pathogenic | -3.004 | Highly Destabilizing | 1.0 | D | 0.842 | deleterious | None | None | None | None | N |
L/H | 0.9623 | likely_pathogenic | 0.9688 | pathogenic | -2.207 | Highly Destabilizing | 1.0 | D | 0.815 | deleterious | D | 0.68482096 | None | None | N |
L/I | 0.293 | likely_benign | 0.3023 | benign | -1.329 | Destabilizing | 0.999 | D | 0.821 | deleterious | D | 0.645626213 | None | None | N |
L/K | 0.9716 | likely_pathogenic | 0.9795 | pathogenic | -1.876 | Destabilizing | 1.0 | D | 0.853 | deleterious | None | None | None | None | N |
L/M | 0.3877 | ambiguous | 0.3903 | ambiguous | -1.134 | Destabilizing | 1.0 | D | 0.845 | deleterious | None | None | None | None | N |
L/N | 0.976 | likely_pathogenic | 0.9805 | pathogenic | -1.957 | Destabilizing | 1.0 | D | 0.865 | deleterious | None | None | None | None | N |
L/P | 0.9876 | likely_pathogenic | 0.9896 | pathogenic | -1.716 | Destabilizing | 1.0 | D | 0.857 | deleterious | D | 0.68482096 | None | None | N |
L/Q | 0.9263 | likely_pathogenic | 0.9396 | pathogenic | -2.057 | Highly Destabilizing | 1.0 | D | 0.863 | deleterious | None | None | None | None | N |
L/R | 0.9519 | likely_pathogenic | 0.9648 | pathogenic | -1.283 | Destabilizing | 1.0 | D | 0.856 | deleterious | D | 0.659282848 | None | None | N |
L/S | 0.9821 | likely_pathogenic | 0.9837 | pathogenic | -2.655 | Highly Destabilizing | 1.0 | D | 0.857 | deleterious | None | None | None | None | N |
L/T | 0.9404 | likely_pathogenic | 0.9462 | pathogenic | -2.42 | Highly Destabilizing | 1.0 | D | 0.852 | deleterious | None | None | None | None | N |
L/V | 0.3829 | ambiguous | 0.387 | ambiguous | -1.716 | Destabilizing | 0.999 | D | 0.825 | deleterious | D | 0.601161323 | None | None | N |
L/W | 0.9494 | likely_pathogenic | 0.9604 | pathogenic | -2.031 | Highly Destabilizing | 1.0 | D | 0.78 | deleterious | None | None | None | None | N |
L/Y | 0.9531 | likely_pathogenic | 0.9605 | pathogenic | -1.812 | Destabilizing | 1.0 | D | 0.835 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.