Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28616 | 86071;86072;86073 | chr2:178560286;178560285;178560284 | chr2:179425013;179425012;179425011 |
N2AB | 26975 | 81148;81149;81150 | chr2:178560286;178560285;178560284 | chr2:179425013;179425012;179425011 |
N2A | 26048 | 78367;78368;78369 | chr2:178560286;178560285;178560284 | chr2:179425013;179425012;179425011 |
N2B | 19551 | 58876;58877;58878 | chr2:178560286;178560285;178560284 | chr2:179425013;179425012;179425011 |
Novex-1 | 19676 | 59251;59252;59253 | chr2:178560286;178560285;178560284 | chr2:179425013;179425012;179425011 |
Novex-2 | 19743 | 59452;59453;59454 | chr2:178560286;178560285;178560284 | chr2:179425013;179425012;179425011 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/L | rs373942982 | None | 0.913 | N | 0.515 | 0.342 | 0.517104213562 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
R/L | rs373942982 | None | 0.913 | N | 0.515 | 0.342 | 0.517104213562 | gnomAD-4.0.0 | 6.57454E-06 | None | None | None | None | N | None | 2.41324E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
R/Q | rs373942982 | 0.038 | 0.997 | N | 0.564 | 0.315 | None | gnomAD-2.1.1 | 2.14E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 4.68E-05 | 0 |
R/Q | rs373942982 | 0.038 | 0.997 | N | 0.564 | 0.315 | None | gnomAD-3.1.2 | 3.29E-05 | None | None | None | None | N | None | 4.83E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 4.41E-05 | 0 | 0 |
R/Q | rs373942982 | 0.038 | 0.997 | N | 0.564 | 0.315 | None | gnomAD-4.0.0 | 2.23096E-05 | None | None | None | None | N | None | 4.00502E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 2.37334E-05 | 1.09789E-05 | 6.40451E-05 |
R/W | rs754025981 | -0.541 | 0.999 | N | 0.619 | 0.471 | None | gnomAD-2.1.1 | 2.14E-05 | None | None | None | None | N | None | 4.13E-05 | 2.83E-05 | None | 0 | 5.13E-05 | None | 3.27E-05 | None | 0 | 1.56E-05 | 0 |
R/W | rs754025981 | -0.541 | 0.999 | N | 0.619 | 0.471 | None | gnomAD-3.1.2 | 3.95E-05 | None | None | None | None | N | None | 2.41E-05 | 6.56E-05 | 0 | 0 | 0 | None | 0 | 0 | 4.41E-05 | 2.07555E-04 | 0 |
R/W | rs754025981 | -0.541 | 0.999 | N | 0.619 | 0.471 | None | gnomAD-4.0.0 | 3.53241E-05 | None | None | None | None | N | None | 4.00555E-05 | 3.33511E-05 | None | 0 | 6.68807E-05 | None | 0 | 0 | 3.81426E-05 | 2.19597E-05 | 3.20236E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.7229 | likely_pathogenic | 0.6945 | pathogenic | -0.153 | Destabilizing | 0.916 | D | 0.535 | neutral | None | None | None | None | N |
R/C | 0.3237 | likely_benign | 0.3241 | benign | -0.325 | Destabilizing | 0.999 | D | 0.637 | neutral | None | None | None | None | N |
R/D | 0.926 | likely_pathogenic | 0.9208 | pathogenic | -0.082 | Destabilizing | 0.996 | D | 0.601 | neutral | None | None | None | None | N |
R/E | 0.6707 | likely_pathogenic | 0.6627 | pathogenic | 0.016 | Stabilizing | 0.957 | D | 0.555 | neutral | None | None | None | None | N |
R/F | 0.7626 | likely_pathogenic | 0.7621 | pathogenic | -0.271 | Destabilizing | 0.95 | D | 0.63 | neutral | None | None | None | None | N |
R/G | 0.6112 | likely_pathogenic | 0.5769 | pathogenic | -0.387 | Destabilizing | 0.977 | D | 0.489 | neutral | N | 0.47218216 | None | None | N |
R/H | 0.1836 | likely_benign | 0.1861 | benign | -0.978 | Destabilizing | 0.975 | D | 0.583 | neutral | None | None | None | None | N |
R/I | 0.4676 | ambiguous | 0.4755 | ambiguous | 0.442 | Stabilizing | 0.975 | D | 0.627 | neutral | None | None | None | None | N |
R/K | 0.1625 | likely_benign | 0.1534 | benign | -0.184 | Destabilizing | 0.901 | D | 0.483 | neutral | None | None | None | None | N |
R/L | 0.4023 | ambiguous | 0.4125 | ambiguous | 0.442 | Stabilizing | 0.913 | D | 0.515 | neutral | N | 0.456894412 | None | None | N |
R/M | 0.4441 | ambiguous | 0.4643 | ambiguous | -0.091 | Destabilizing | 0.999 | D | 0.571 | neutral | None | None | None | None | N |
R/N | 0.8682 | likely_pathogenic | 0.8586 | pathogenic | -0.029 | Destabilizing | 0.987 | D | 0.551 | neutral | None | None | None | None | N |
R/P | 0.8877 | likely_pathogenic | 0.8723 | pathogenic | 0.265 | Stabilizing | 0.998 | D | 0.595 | neutral | N | 0.484678446 | None | None | N |
R/Q | 0.1649 | likely_benign | 0.1634 | benign | -0.064 | Destabilizing | 0.997 | D | 0.564 | neutral | N | 0.454392825 | None | None | N |
R/S | 0.8195 | likely_pathogenic | 0.7954 | pathogenic | -0.427 | Destabilizing | 0.987 | D | 0.515 | neutral | None | None | None | None | N |
R/T | 0.5085 | ambiguous | 0.4936 | ambiguous | -0.169 | Destabilizing | 0.987 | D | 0.504 | neutral | None | None | None | None | N |
R/V | 0.5618 | ambiguous | 0.5687 | pathogenic | 0.265 | Stabilizing | 0.975 | D | 0.57 | neutral | None | None | None | None | N |
R/W | 0.2311 | likely_benign | 0.2589 | benign | -0.281 | Destabilizing | 0.999 | D | 0.619 | neutral | N | 0.479525994 | None | None | N |
R/Y | 0.5889 | likely_pathogenic | 0.6013 | pathogenic | 0.115 | Stabilizing | 0.073 | N | 0.399 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.