Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28625 | 86098;86099;86100 | chr2:178560259;178560258;178560257 | chr2:179424986;179424985;179424984 |
N2AB | 26984 | 81175;81176;81177 | chr2:178560259;178560258;178560257 | chr2:179424986;179424985;179424984 |
N2A | 26057 | 78394;78395;78396 | chr2:178560259;178560258;178560257 | chr2:179424986;179424985;179424984 |
N2B | 19560 | 58903;58904;58905 | chr2:178560259;178560258;178560257 | chr2:179424986;179424985;179424984 |
Novex-1 | 19685 | 59278;59279;59280 | chr2:178560259;178560258;178560257 | chr2:179424986;179424985;179424984 |
Novex-2 | 19752 | 59479;59480;59481 | chr2:178560259;178560258;178560257 | chr2:179424986;179424985;179424984 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | None | None | 0.997 | N | 0.643 | 0.425 | 0.723563167763 | gnomAD-4.0.0 | 1.20033E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.31251E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.6274 | likely_pathogenic | 0.5898 | pathogenic | -2.599 | Highly Destabilizing | 0.999 | D | 0.663 | neutral | D | 0.561696153 | None | None | N |
V/C | 0.9288 | likely_pathogenic | 0.9215 | pathogenic | -1.852 | Destabilizing | 1.0 | D | 0.801 | deleterious | None | None | None | None | N |
V/D | 0.9957 | likely_pathogenic | 0.9961 | pathogenic | -3.457 | Highly Destabilizing | 1.0 | D | 0.886 | deleterious | D | 0.65316446 | None | None | N |
V/E | 0.9896 | likely_pathogenic | 0.9907 | pathogenic | -3.148 | Highly Destabilizing | 1.0 | D | 0.869 | deleterious | None | None | None | None | N |
V/F | 0.8788 | likely_pathogenic | 0.8938 | pathogenic | -1.51 | Destabilizing | 1.0 | D | 0.828 | deleterious | D | 0.584408764 | None | None | N |
V/G | 0.8022 | likely_pathogenic | 0.8035 | pathogenic | -3.151 | Highly Destabilizing | 1.0 | D | 0.879 | deleterious | D | 0.65316446 | None | None | N |
V/H | 0.9971 | likely_pathogenic | 0.9974 | pathogenic | -2.972 | Highly Destabilizing | 1.0 | D | 0.874 | deleterious | None | None | None | None | N |
V/I | 0.1078 | likely_benign | 0.108 | benign | -0.963 | Destabilizing | 0.997 | D | 0.643 | neutral | N | 0.514804644 | None | None | N |
V/K | 0.9929 | likely_pathogenic | 0.9946 | pathogenic | -2.138 | Highly Destabilizing | 1.0 | D | 0.869 | deleterious | None | None | None | None | N |
V/L | 0.5323 | ambiguous | 0.5607 | ambiguous | -0.963 | Destabilizing | 0.997 | D | 0.681 | prob.neutral | N | 0.517481791 | None | None | N |
V/M | 0.7065 | likely_pathogenic | 0.7032 | pathogenic | -1.23 | Destabilizing | 1.0 | D | 0.797 | deleterious | None | None | None | None | N |
V/N | 0.9841 | likely_pathogenic | 0.9849 | pathogenic | -2.837 | Highly Destabilizing | 1.0 | D | 0.895 | deleterious | None | None | None | None | N |
V/P | 0.9913 | likely_pathogenic | 0.9901 | pathogenic | -1.496 | Destabilizing | 1.0 | D | 0.874 | deleterious | None | None | None | None | N |
V/Q | 0.9883 | likely_pathogenic | 0.9895 | pathogenic | -2.479 | Highly Destabilizing | 1.0 | D | 0.888 | deleterious | None | None | None | None | N |
V/R | 0.9835 | likely_pathogenic | 0.9864 | pathogenic | -2.2 | Highly Destabilizing | 1.0 | D | 0.898 | deleterious | None | None | None | None | N |
V/S | 0.9186 | likely_pathogenic | 0.9093 | pathogenic | -3.248 | Highly Destabilizing | 1.0 | D | 0.868 | deleterious | None | None | None | None | N |
V/T | 0.8341 | likely_pathogenic | 0.8143 | pathogenic | -2.8 | Highly Destabilizing | 0.999 | D | 0.695 | prob.neutral | None | None | None | None | N |
V/W | 0.9982 | likely_pathogenic | 0.9984 | pathogenic | -1.988 | Destabilizing | 1.0 | D | 0.865 | deleterious | None | None | None | None | N |
V/Y | 0.9882 | likely_pathogenic | 0.9898 | pathogenic | -1.788 | Destabilizing | 1.0 | D | 0.827 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.