Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28633 | 86122;86123;86124 | chr2:178560235;178560234;178560233 | chr2:179424962;179424961;179424960 |
N2AB | 26992 | 81199;81200;81201 | chr2:178560235;178560234;178560233 | chr2:179424962;179424961;179424960 |
N2A | 26065 | 78418;78419;78420 | chr2:178560235;178560234;178560233 | chr2:179424962;179424961;179424960 |
N2B | 19568 | 58927;58928;58929 | chr2:178560235;178560234;178560233 | chr2:179424962;179424961;179424960 |
Novex-1 | 19693 | 59302;59303;59304 | chr2:178560235;178560234;178560233 | chr2:179424962;179424961;179424960 |
Novex-2 | 19760 | 59503;59504;59505 | chr2:178560235;178560234;178560233 | chr2:179424962;179424961;179424960 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/R | None | None | 0.997 | N | 0.812 | 0.395 | 0.722873759412 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.2546 | likely_benign | 0.2611 | benign | -1.149 | Destabilizing | 0.953 | D | 0.637 | neutral | None | None | None | None | I |
L/C | 0.4008 | ambiguous | 0.3807 | ambiguous | -0.843 | Destabilizing | 0.999 | D | 0.77 | deleterious | None | None | None | None | I |
L/D | 0.6243 | likely_pathogenic | 0.6239 | pathogenic | 0.03 | Stabilizing | 0.998 | D | 0.811 | deleterious | None | None | None | None | I |
L/E | 0.3571 | ambiguous | 0.3656 | ambiguous | 0.011 | Stabilizing | 0.998 | D | 0.808 | deleterious | None | None | None | None | I |
L/F | 0.1255 | likely_benign | 0.125 | benign | -0.759 | Destabilizing | 0.986 | D | 0.77 | deleterious | None | None | None | None | I |
L/G | 0.5135 | ambiguous | 0.5137 | ambiguous | -1.418 | Destabilizing | 0.998 | D | 0.808 | deleterious | None | None | None | None | I |
L/H | 0.2569 | likely_benign | 0.2552 | benign | -0.444 | Destabilizing | 0.999 | D | 0.812 | deleterious | None | None | None | None | I |
L/I | 0.0772 | likely_benign | 0.0805 | benign | -0.516 | Destabilizing | 0.046 | N | 0.301 | neutral | N | 0.443637113 | None | None | I |
L/K | 0.2713 | likely_benign | 0.2764 | benign | -0.557 | Destabilizing | 0.993 | D | 0.805 | deleterious | None | None | None | None | I |
L/M | 0.1152 | likely_benign | 0.1207 | benign | -0.527 | Destabilizing | 0.986 | D | 0.743 | deleterious | None | None | None | None | I |
L/N | 0.3272 | likely_benign | 0.3301 | benign | -0.378 | Destabilizing | 0.998 | D | 0.814 | deleterious | None | None | None | None | I |
L/P | 0.2105 | likely_benign | 0.2002 | benign | -0.694 | Destabilizing | 0.997 | D | 0.811 | deleterious | N | 0.499010394 | None | None | I |
L/Q | 0.1872 | likely_benign | 0.1857 | benign | -0.519 | Destabilizing | 0.997 | D | 0.815 | deleterious | N | 0.484232942 | None | None | I |
L/R | 0.2127 | likely_benign | 0.2083 | benign | -0.025 | Destabilizing | 0.997 | D | 0.812 | deleterious | N | 0.489332118 | None | None | I |
L/S | 0.3052 | likely_benign | 0.2989 | benign | -1.065 | Destabilizing | 0.993 | D | 0.802 | deleterious | None | None | None | None | I |
L/T | 0.2215 | likely_benign | 0.2177 | benign | -0.956 | Destabilizing | 0.986 | D | 0.726 | prob.delet. | None | None | None | None | I |
L/V | 0.0851 | likely_benign | 0.0871 | benign | -0.694 | Destabilizing | 0.17 | N | 0.336 | neutral | N | 0.428649018 | None | None | I |
L/W | 0.256 | likely_benign | 0.2463 | benign | -0.735 | Destabilizing | 0.999 | D | 0.791 | deleterious | None | None | None | None | I |
L/Y | 0.2802 | likely_benign | 0.2762 | benign | -0.523 | Destabilizing | 0.998 | D | 0.785 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.