Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC2863386122;86123;86124 chr2:178560235;178560234;178560233chr2:179424962;179424961;179424960
N2AB2699281199;81200;81201 chr2:178560235;178560234;178560233chr2:179424962;179424961;179424960
N2A2606578418;78419;78420 chr2:178560235;178560234;178560233chr2:179424962;179424961;179424960
N2B1956858927;58928;58929 chr2:178560235;178560234;178560233chr2:179424962;179424961;179424960
Novex-11969359302;59303;59304 chr2:178560235;178560234;178560233chr2:179424962;179424961;179424960
Novex-21976059503;59504;59505 chr2:178560235;178560234;178560233chr2:179424962;179424961;179424960
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: L
  • RefSeq wild type transcript codon: CTA
  • RefSeq wild type template codon: GAT
  • Domain: Fn3-96
  • Domain position: 84
  • Structural Position: 117
  • Q(SASA): 0.4955
  • Predicted PPI site: I

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
L/R None None 0.997 N 0.812 0.395 0.722873759412 gnomAD-4.0.0 2.40064E-06 None None None None I None 0 0 None 0 0 None 0 0 2.625E-06 0 0

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
L/A 0.2546 likely_benign 0.2611 benign -1.149 Destabilizing 0.953 D 0.637 neutral None None None None I
L/C 0.4008 ambiguous 0.3807 ambiguous -0.843 Destabilizing 0.999 D 0.77 deleterious None None None None I
L/D 0.6243 likely_pathogenic 0.6239 pathogenic 0.03 Stabilizing 0.998 D 0.811 deleterious None None None None I
L/E 0.3571 ambiguous 0.3656 ambiguous 0.011 Stabilizing 0.998 D 0.808 deleterious None None None None I
L/F 0.1255 likely_benign 0.125 benign -0.759 Destabilizing 0.986 D 0.77 deleterious None None None None I
L/G 0.5135 ambiguous 0.5137 ambiguous -1.418 Destabilizing 0.998 D 0.808 deleterious None None None None I
L/H 0.2569 likely_benign 0.2552 benign -0.444 Destabilizing 0.999 D 0.812 deleterious None None None None I
L/I 0.0772 likely_benign 0.0805 benign -0.516 Destabilizing 0.046 N 0.301 neutral N 0.443637113 None None I
L/K 0.2713 likely_benign 0.2764 benign -0.557 Destabilizing 0.993 D 0.805 deleterious None None None None I
L/M 0.1152 likely_benign 0.1207 benign -0.527 Destabilizing 0.986 D 0.743 deleterious None None None None I
L/N 0.3272 likely_benign 0.3301 benign -0.378 Destabilizing 0.998 D 0.814 deleterious None None None None I
L/P 0.2105 likely_benign 0.2002 benign -0.694 Destabilizing 0.997 D 0.811 deleterious N 0.499010394 None None I
L/Q 0.1872 likely_benign 0.1857 benign -0.519 Destabilizing 0.997 D 0.815 deleterious N 0.484232942 None None I
L/R 0.2127 likely_benign 0.2083 benign -0.025 Destabilizing 0.997 D 0.812 deleterious N 0.489332118 None None I
L/S 0.3052 likely_benign 0.2989 benign -1.065 Destabilizing 0.993 D 0.802 deleterious None None None None I
L/T 0.2215 likely_benign 0.2177 benign -0.956 Destabilizing 0.986 D 0.726 prob.delet. None None None None I
L/V 0.0851 likely_benign 0.0871 benign -0.694 Destabilizing 0.17 N 0.336 neutral N 0.428649018 None None I
L/W 0.256 likely_benign 0.2463 benign -0.735 Destabilizing 0.999 D 0.791 deleterious None None None None I
L/Y 0.2802 likely_benign 0.2762 benign -0.523 Destabilizing 0.998 D 0.785 deleterious None None None None I

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.