Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28635 | 86128;86129;86130 | chr2:178560229;178560228;178560227 | chr2:179424956;179424955;179424954 |
N2AB | 26994 | 81205;81206;81207 | chr2:178560229;178560228;178560227 | chr2:179424956;179424955;179424954 |
N2A | 26067 | 78424;78425;78426 | chr2:178560229;178560228;178560227 | chr2:179424956;179424955;179424954 |
N2B | 19570 | 58933;58934;58935 | chr2:178560229;178560228;178560227 | chr2:179424956;179424955;179424954 |
Novex-1 | 19695 | 59308;59309;59310 | chr2:178560229;178560228;178560227 | chr2:179424956;179424955;179424954 |
Novex-2 | 19762 | 59509;59510;59511 | chr2:178560229;178560228;178560227 | chr2:179424956;179424955;179424954 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/I | rs2154158514 | None | 0.801 | N | 0.501 | 0.126 | 0.422762650823 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
L/I | rs2154158514 | None | 0.801 | N | 0.501 | 0.126 | 0.422762650823 | gnomAD-4.0.0 | 6.56823E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.47016E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.0933 | likely_benign | 0.0971 | benign | -1.005 | Destabilizing | 0.002 | N | 0.19 | neutral | None | None | None | None | I |
L/C | 0.2717 | likely_benign | 0.3002 | benign | -0.732 | Destabilizing | 0.998 | D | 0.514 | neutral | None | None | None | None | I |
L/D | 0.2685 | likely_benign | 0.2882 | benign | -0.13 | Destabilizing | 0.974 | D | 0.538 | neutral | None | None | None | None | I |
L/E | 0.1407 | likely_benign | 0.138 | benign | -0.171 | Destabilizing | 0.842 | D | 0.557 | neutral | None | None | None | None | I |
L/F | 0.0948 | likely_benign | 0.0963 | benign | -0.754 | Destabilizing | 0.989 | D | 0.492 | neutral | N | 0.4752481 | None | None | I |
L/G | 0.2215 | likely_benign | 0.2327 | benign | -1.234 | Destabilizing | 0.728 | D | 0.533 | neutral | None | None | None | None | I |
L/H | 0.1163 | likely_benign | 0.1211 | benign | -0.332 | Destabilizing | 0.997 | D | 0.513 | neutral | N | 0.458835852 | None | None | I |
L/I | 0.0846 | likely_benign | 0.0882 | benign | -0.492 | Destabilizing | 0.801 | D | 0.501 | neutral | N | 0.466263257 | None | None | I |
L/K | 0.1231 | likely_benign | 0.1255 | benign | -0.491 | Destabilizing | 0.067 | N | 0.33 | neutral | None | None | None | None | I |
L/M | 0.0919 | likely_benign | 0.092 | benign | -0.547 | Destabilizing | 0.991 | D | 0.511 | neutral | None | None | None | None | I |
L/N | 0.1636 | likely_benign | 0.1784 | benign | -0.334 | Destabilizing | 0.974 | D | 0.522 | neutral | None | None | None | None | I |
L/P | 0.0753 | likely_benign | 0.0733 | benign | -0.63 | Destabilizing | 0.966 | D | 0.539 | neutral | N | 0.38146836 | None | None | I |
L/Q | 0.0813 | likely_benign | 0.0817 | benign | -0.497 | Destabilizing | 0.949 | D | 0.524 | neutral | None | None | None | None | I |
L/R | 0.114 | likely_benign | 0.1122 | benign | 0.053 | Stabilizing | 0.876 | D | 0.533 | neutral | N | 0.398883472 | None | None | I |
L/S | 0.0958 | likely_benign | 0.1018 | benign | -0.902 | Destabilizing | 0.728 | D | 0.491 | neutral | None | None | None | None | I |
L/T | 0.1088 | likely_benign | 0.1168 | benign | -0.821 | Destabilizing | 0.842 | D | 0.5 | neutral | None | None | None | None | I |
L/V | 0.0746 | likely_benign | 0.0765 | benign | -0.63 | Destabilizing | 0.454 | N | 0.488 | neutral | N | 0.423280484 | None | None | I |
L/W | 0.1672 | likely_benign | 0.1774 | benign | -0.751 | Destabilizing | 0.998 | D | 0.629 | neutral | None | None | None | None | I |
L/Y | 0.1715 | likely_benign | 0.1828 | benign | -0.527 | Destabilizing | 0.991 | D | 0.523 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.