Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28636 | 86131;86132;86133 | chr2:178560226;178560225;178560224 | chr2:179424953;179424952;179424951 |
N2AB | 26995 | 81208;81209;81210 | chr2:178560226;178560225;178560224 | chr2:179424953;179424952;179424951 |
N2A | 26068 | 78427;78428;78429 | chr2:178560226;178560225;178560224 | chr2:179424953;179424952;179424951 |
N2B | 19571 | 58936;58937;58938 | chr2:178560226;178560225;178560224 | chr2:179424953;179424952;179424951 |
Novex-1 | 19696 | 59311;59312;59313 | chr2:178560226;178560225;178560224 | chr2:179424953;179424952;179424951 |
Novex-2 | 19763 | 59512;59513;59514 | chr2:178560226;178560225;178560224 | chr2:179424953;179424952;179424951 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/R | rs879238812 | -0.561 | 1.0 | D | 0.854 | 0.485 | None | gnomAD-2.1.1 | 7.14E-06 | None | None | None | None | I | None | 8.27E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
P/R | rs879238812 | -0.561 | 1.0 | D | 0.854 | 0.485 | None | gnomAD-3.1.2 | 1.31E-05 | None | None | None | None | I | None | 4.83E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
P/R | rs879238812 | -0.561 | 1.0 | D | 0.854 | 0.485 | None | gnomAD-4.0.0 | 3.8435E-06 | None | None | None | None | I | None | 5.07528E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.1074 | likely_benign | 0.1168 | benign | -1.633 | Destabilizing | 1.0 | D | 0.741 | deleterious | N | 0.491395143 | None | None | I |
P/C | 0.6064 | likely_pathogenic | 0.6436 | pathogenic | -0.946 | Destabilizing | 1.0 | D | 0.825 | deleterious | None | None | None | None | I |
P/D | 0.8699 | likely_pathogenic | 0.9004 | pathogenic | -1.424 | Destabilizing | 1.0 | D | 0.781 | deleterious | None | None | None | None | I |
P/E | 0.6227 | likely_pathogenic | 0.6728 | pathogenic | -1.378 | Destabilizing | 1.0 | D | 0.784 | deleterious | None | None | None | None | I |
P/F | 0.6803 | likely_pathogenic | 0.7085 | pathogenic | -1.168 | Destabilizing | 1.0 | D | 0.847 | deleterious | None | None | None | None | I |
P/G | 0.5278 | ambiguous | 0.583 | pathogenic | -1.995 | Destabilizing | 1.0 | D | 0.797 | deleterious | None | None | None | None | I |
P/H | 0.4589 | ambiguous | 0.5167 | ambiguous | -1.558 | Destabilizing | 1.0 | D | 0.821 | deleterious | None | None | None | None | I |
P/I | 0.5856 | likely_pathogenic | 0.6014 | pathogenic | -0.713 | Destabilizing | 1.0 | D | 0.87 | deleterious | None | None | None | None | I |
P/K | 0.6579 | likely_pathogenic | 0.7251 | pathogenic | -1.232 | Destabilizing | 1.0 | D | 0.785 | deleterious | None | None | None | None | I |
P/L | 0.2804 | likely_benign | 0.2892 | benign | -0.713 | Destabilizing | 1.0 | D | 0.83 | deleterious | N | 0.514690411 | None | None | I |
P/M | 0.5936 | likely_pathogenic | 0.6126 | pathogenic | -0.517 | Destabilizing | 1.0 | D | 0.819 | deleterious | None | None | None | None | I |
P/N | 0.7878 | likely_pathogenic | 0.83 | pathogenic | -1.08 | Destabilizing | 1.0 | D | 0.851 | deleterious | None | None | None | None | I |
P/Q | 0.3995 | ambiguous | 0.4471 | ambiguous | -1.194 | Destabilizing | 1.0 | D | 0.811 | deleterious | D | 0.542962884 | None | None | I |
P/R | 0.4829 | ambiguous | 0.5369 | ambiguous | -0.788 | Destabilizing | 1.0 | D | 0.854 | deleterious | D | 0.542455905 | None | None | I |
P/S | 0.2751 | likely_benign | 0.3097 | benign | -1.654 | Destabilizing | 1.0 | D | 0.783 | deleterious | N | 0.512070292 | None | None | I |
P/T | 0.3167 | likely_benign | 0.336 | benign | -1.496 | Destabilizing | 1.0 | D | 0.783 | deleterious | D | 0.531188505 | None | None | I |
P/V | 0.4045 | ambiguous | 0.4158 | ambiguous | -0.986 | Destabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | I |
P/W | 0.8051 | likely_pathogenic | 0.8455 | pathogenic | -1.427 | Destabilizing | 1.0 | D | 0.804 | deleterious | None | None | None | None | I |
P/Y | 0.686 | likely_pathogenic | 0.734 | pathogenic | -1.112 | Destabilizing | 1.0 | D | 0.858 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.